Porphyromonas sp. oral taxon 275: J4862_05935
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Entry
J4862_05935 CDS
T08761
Symbol
mnmE
Name
(GenBank) tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
porp
Porphyromonas sp. oral taxon 275
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
porp03016
]
J4862_05935 (mnmE)
Transfer RNA biogenesis [BR:
porp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
J4862_05935 (mnmE)
Prokaryotic type
Methyltransferases
J4862_05935 (mnmE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
GTP_EFTU
Dynamin_N
Arf
ABC_tran
AIG1
DUF6099
cobW
ABC_ATPase
AAA_16
AAA_29
Guanylate_kin
MMR_HSR1_Xtn
Motif
Other DBs
NCBI-ProteinID:
QUB42541
LinkDB
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Position
1490351..1491928
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AA seq
525 aa
AA seq
DB search
MSYTPLMSDTICAVATAPGVGGVALIRVSGSEARGIVDQIFHCRQLATLERAKDRCAYFG
RIVHEGKFLDEVLVTCFYAPHSYTGEDVVEIACHGSLYIQQALLEALTDQGCRMAEPGEY
TRRAYLNGKMDLSRAEAVADLIASESAAQHRMALTQMRGGYSREFAQLRERLIQLTALME
LELDFSEEDVTFADRSELLSLSQELETKIQSLVESFRLGNAIKKGIPVALAGATNVGKST
LLNALLGEERAIVSDIHGTTRDTVEEVMNVDGLLFRFIDTAGLRHTADQIEALGIERSYA
RIDEASLILLVLDASRLLQALPPAVSQHLSSAHPASPGDRADQLKPTAETSNKGCHSELQ
QPHAPEPQEPADQLAEVQQLRQRLDPARLIVLLNKVDLLDPAELEQLLDQLPQLLELSAD
IPILPLAARMGSGLPELRKALVTRLALPELSPSSLVVSNARHHALLKQAAAQLALVRQGL
AEGLPTDLLAPDLHLAISALGEVTGGEITSDAVLHHIFAHFCIGK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagctataccccccttatgagcgacacgatctgcgccgtagccaccgcccctggcgtc
ggcggcgtcgccctcatccgcgtctcgggcagcgaagcccgcggcatcgtcgatcagatc
ttccactgccgccagctcgccactctggagcgggcgaaggatcgctgtgcctacttcggc
cggatcgtccatgaggggaagttcctcgacgaggtgctggtcacctgcttctacgccccg
cacagctacacgggtgaggacgtggtggagatcgcttgccacggctccctctacatacag
caggcgctcctcgaggcgctgaccgaccaaggctgccgcatggccgagccaggcgaatac
acccgccgcgcctacctcaacggcaagatggacctcagccgcgccgaggccgtggccgac
ctcatcgcctcggagagtgccgcgcagcaccgcatggccctcacgcagatgcgcggcggc
tacagccgtgagttcgcccagctccgcgagcgcctcatccagctgacggccttgatggag
ctcgagctggacttcagcgaggaggatgtcaccttcgccgatcgcagcgagctcttgagc
ctgagccaggagctggagacgaagatccagagcctcgtcgagagcttccgcctcggcaat
gccatcaagaagggtattcccgtggcgctggctggcgcaaccaacgtgggcaagagcacc
ctcctcaacgccctcctcggcgaggagcgtgccatcgtcagcgacatccacggcacgacg
cgcgacaccgtggaggaggtgatgaacgtcgatggcctgctcttccgcttcatcgacacc
gcagggctgcgccacacggccgaccagatcgaagccctcggcatagagcgcagctacgcc
cggattgacgaggccagcctcatcctcctcgtcctcgacgcctcccgcctgctccaagcc
ctcccccctgccgtctcccagcacttatcctccgcccaccccgcctccccaggcgacaga
gcggaccagctcaagcccaccgccgaaaccagcaataagggctgccacagcgaactgcag
cagccccacgcccccgagcctcaagagccagcggaccagcttgccgaggtgcagcagcta
cgccagcgcctcgaccccgcacggctcatcgtcctactgaataaggtagacctcctcgac
ccagccgaactagagcagctccttgaccaactgccgcagctcctcgagctcagcgccgat
atccccatcctcccgctagcagcgcgcatgggcagcgggctccccgagctccgcaaggcg
ctggtcacgcgcctcgccctccccgagctaagtccctcttcgctcgtggtaagcaacgcc
cgtcaccatgccctgctcaagcaagccgccgcccaacttgcgctcgttcgtcaaggcctc
gccgaaggcctcccgaccgacctcctagcccccgatcttcacctcgcgatcagcgccctc
ggcgaagtcactggcggcgagatcaccagcgacgccgtcctccaccacatcttcgcccac
ttctgcatcggcaagtaa
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