Porphyromonas sp. oral taxon 275: J4862_06695
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Entry
J4862_06695 CDS
T08761
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J4862_06695 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_06695 (uvrB)
DNA repair and recombination proteins [BR:
porp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J4862_06695 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J4862_06695 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_3rd
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
UB2H
Knl-2-like_dom
Motif
Other DBs
NCBI-ProteinID:
QUB42689
LinkDB
All DBs
Position
complement(1695485..1697509)
Genome browser
AA seq
674 aa
AA seq
DB search
MPFQLTSRFRPTGDQPQAIDELVRGFEQGVPFQTLLGVTGSGKTFTAANVIAGVQKPTLV
LSHNKTLAAQLYAEFKAFFPDNAVEYFVSYYDYYQPEAYIAASDTYIEKDMAINAEIEKL
RLRATASLLSGRQDVIVISSVSCLYGMADPKAFEEKIIRLSEGDHYSLEQFKRDLVLNHY
VNDRITFEAGYFRVKGDTVDVFPAIEGFDGVAYRVTFWDGEIERIASFDPISGREYGPLS
RLVIHPANLFVTTQEQVNTAVGQIDVDLGARVAELEAEDKPYEAKRLYERTTYDLEMIRE
LGYCSGIENYSRYFDGRKPGERPFCLLDYFPKDFLLIIDESHVTVPQIHAMYGGDRSRKI
SLVEHGFRLPAALDNRPLTFEEFDSLTPRILYISATPAEYELAKSEGVVVEQLIRPTGLL
DPIIEVRPTAHQVDDLEHEIQLAVEAGERVLVTTLTKRMAEELSEYLLRHGVACSYIHSD
VSTLDRIQIMEDLRAGKYDVLIGVNLLREGLDLPEVALVAVLDADKEGFLRSHRSLTQTA
GRAARNVRGRVIFYGDKITDSMRRTIEETERRRRKQIAYNEAHGITPQQIVKNSSSIFPD
RKGDEGQPVAYMEADPTAAVPDPLEEVLSVDKLKKLVELKRSEMMAAAAELDFIEAARLR
NELQHLEERVRLLS
NT seq
2025 nt
NT seq
+upstream
nt +downstream
nt
atgccttttcagcttacctcccgcttccgcccgacaggcgaccagccgcaggccatcgac
gagctcgtccgtggcttcgagcagggcgtgcccttccagacgctgctcggggtgacgggc
tcggggaagaccttcactgcggccaatgtcatcgcgggcgtccagaagccgacgctcgtg
ctgagccacaacaagacgctggccgcgcagctctacgccgagttcaaggccttcttcccc
gacaacgccgtcgagtacttcgtctcctactacgactactaccagcccgaggcctatatc
gctgcctccgatacctacatcgagaaggatatggccatcaatgccgagatcgagaagctg
cgcctcagggcgacggcctcgctgctctcggggcgccaggacgtcatcgtcatctcctcc
gtctcctgcctctatggtatggctgaccccaaggccttcgaggagaagatcatccgcctg
agcgagggcgaccactatagtctagagcagttcaagcgtgacctcgtgctcaaccactat
gtcaatgaccgcatcaccttcgaggcgggctacttccgcgtcaagggggatacggtggat
gtcttccccgcgatcgaaggcttcgacggcgtggcctaccgcgtgaccttctgggacgga
gagatcgagcgcatcgcttccttcgaccccatcagtgggcgcgagtacggccctctgtcg
cgtctggtgatccatcccgccaacctcttcgtcacgacccaggagcaggtcaataccgcc
gtggggcagatcgacgtcgacctcggtgcccgcgtggcggagctggaggctgaggacaag
ccctacgaggccaagcgtctctacgagcgcaccacctatgacctggagatgatacgcgag
ctgggctattgctcgggcattgagaactattcccgctacttcgatgggcgcaagcctggc
gagcgccccttctgcctgctggactacttccccaaggacttcctccttattatcgacgag
agccacgtcaccgtcccgcagatccacgccatgtacggcggcgaccgaagccgcaagatc
agcctcgtggagcacggcttccgcctgccggccgcgctggataataggccgctgaccttt
gaggagttcgacagcctgaccccgcgtatcctctacatcagtgctacgccagccgaatac
gagctggccaagagcgagggcgtggtggtcgagcagctcatccgcccgacgggtctacta
gatcccatcatcgaggtgcgccccacggcgcatcaggtcgatgacctcgagcacgagatc
cagctggcggtggaggctggggagcgcgtgctggtgacgacgctcaccaagcgcatggcc
gaggagctctcggagtacctgctgcgccatggcgtcgcctgcagctatatccatagcgac
gtcagcaccctcgaccgcatacagatcatggaggacctgcgcgcgggtaagtacgacgtc
ctcatcggcgtcaacctcctgcgtgaggggcttgacctacccgaggtagcgctggtggcg
gtgctggatgccgataaggaaggcttcctccgctcgcatcgctcactgacgcagacggca
ggccgcgcggcgcgtaacgtccgtggccgcgtcatcttctacggggacaagatcaccgac
agcatgcgccgcaccatagaggagaccgagcgccgccgtcgcaagcagatcgcctacaat
gaggcacacggcatcacgccgcagcagatcgtcaagaacagcagctctatcttccccgac
cgcaagggggacgaagggcagcccgtggcctacatggaggccgaccccacggctgctgtg
cccgatccgctggaggaggtgctgagcgtcgacaagctcaagaagctcgtcgagctcaag
cgctccgagatgatggctgccgctgccgagctcgacttcatcgaggctgcgcgcctgcgc
aacgagcttcagcacctcgaggagcgcgtccgtctgcttagctag
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integrated database retrieval system
