Porphyromonas sp. oral taxon 275: J4862_06780
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Entry
J4862_06780 CDS
T08761
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
J4862_06780 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
porp03400
]
J4862_06780 (ung)
Enzymes [BR:
porp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
J4862_06780 (ung)
DNA repair and recombination proteins [BR:
porp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
J4862_06780 (ung)
Prokaryotic type
J4862_06780 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QUB42705
LinkDB
All DBs
Position
1717419..1718087
Genome browser
AA seq
222 aa
AA seq
DB search
MNVRIEASWREALAAEFDKLYFGILTDRIRSEYQSGHAIYPPAGQIFRALDLCPLDRVRV
VILGQDPYHGAGQAEGLAFSVPHGIAVPPSLVNIKQEIADDLGRPSIITGGELLPWVEQG
VLLLNTTLTVRSGEAASHQGLGWETFTDAVIQLVSQRCDHVVFLLWGSPARRKAAMIDAT
RHCILEAPHPSPLSAHRGFFGCRHFSRANAYLQQQGLAPIQW
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtccgtatcgaagccagctggcgcgaggccctcgccgccgagttcgacaagctc
tacttcggcatcctcaccgacaggatacgcagcgagtaccagagcggtcacgccatctac
ccacccgcagggcagatcttccgcgccctcgacctctgtcccctcgatcgggtacgcgtc
gtcatcttaggccaagacccctaccacggcgcgggccaagccgagggtctcgccttctcc
gtcccccatggcatcgctgtgccgccgagcctggtgaacatcaagcaagagatcgccgac
gacctcggccgcccctccatcatcaccggcggcgagctcctaccctgggtggagcagggc
gtactgctgctcaataccacgctcaccgtccgctcgggcgaggccgcctcccatcagggg
ctgggctgggagaccttcaccgacgccgtcatccagctggtcagccagcgctgcgaccat
gtcgtcttcctcctctggggtagccccgctaggcgtaaggccgctatgatcgacgccacg
cgccactgcattctggaggcgccgcacccctcgccgctgtcggcgcaccgcggcttcttc
ggctgccgccacttctcccgcgccaatgcctacctccagcagcagggccttgcccctatc
cagtggtag
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