Porphyromonas sp. oral taxon 275: J4862_08050
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Entry
J4862_08050 CDS
T08761
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
porp
Porphyromonas sp. oral taxon 275
Pathway
porp00550
Peptidoglycan biosynthesis
porp01100
Metabolic pathways
porp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
porp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J4862_08050 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J4862_08050 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
porp01011
]
J4862_08050 (mrdA)
Enzymes [BR:
porp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J4862_08050 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
porp01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J4862_08050 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QUB42926
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All DBs
Position
complement(1994884..1996743)
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AA seq
619 aa
AA seq
DB search
MVSDELYKRRLLLPLLTVVIVGVFVMRLFFLQVASNDYKRRAENNAYYILSTIPARGVIY
DRYGQLLVANRPIYDLMVVMHQAKDKLDTTLLASTLGLPREEIVARLAAVRDRSINRGYN
PYTPQVLLSQLEPEDVGRFEEQLYKFPGFSVRSRTIRQYDYHNGAHLLGYMSEASTADLE
RDSAIMSGDFVGRSGVERTYDEVLRGEKGQEIFYRDARGRIQGRLDGGTHDKAPVPGRDL
TLSIDAGLQALGERMMRGKRGAIVAIEPETGEVLAMVTAPNYDPALLAGKDKGSNHRMLE
ESYGKPLLNRAIQGNYPPGSTFKPAQGAIFLAEGVLSPSTPLSCYGGYPRLGGKPKCHPH
GSPISLVPALATSCNAYFCWGMHFLLDDRKRYPSVEVALEHWKERIVRLGYGYRLGVDLP
GEKRGYIPNSSVYDKAYKGRWNSSTIISISIGQGEVLATPLQIANLAAIIANRGSYVRPH
LVRHISGQRLDTMYTQRQQSGISPEHWEYIVQGMAQAVTGGTCRAANFAPGQVEVCGKTG
TAENPHGKDHSAFIGFAPRSRPRIAVSVYVENGGFGAHYGVPIGRVMMEYYLRGGKLSGA
GEAIASQMEHRSISYLNDL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggtcagtgacgaactctacaagcgtcgcctgctgctccccctactgacggtcgtcatc
gtcggggtcttcgtcatgcggctcttcttccttcaggtcgctagcaacgactacaaacgt
cgtgccgagaacaacgcctactacatcctctccaccatcccagcccgcggggtgatctat
gatcgctacgggcagctgctggtggcgaaccgccccatctacgacctcatggtcgtgatg
catcaggctaaggacaagctcgatacgacgctgctagcctcgacgctgggcctgccgcgc
gaggagatcgtagcgcgcctggctgccgtccgagaccgcagtatcaaccgcggctacaat
ccctacacgccgcaggtgctgctctcgcagctcgagcccgaggatgtgggccgcttcgag
gagcagctgtataagttccccggcttctccgtccgctcccgcacgatacgtcagtacgat
taccacaacggcgcccatctgctgggctatatgtccgaggcctccacggccgacctcgag
cgcgacagtgccatcatgtcgggcgacttcgtcgggcgtagcggcgtggagcgtacctat
gatgaggtgctgcgtggggagaaggggcaagagatcttctaccgcgatgcccgcggccgt
atccaggggcgcctcgatggcgggacgcatgacaaggcccccgtccctggccgcgacctc
accctatctatagacgcggggctccaagccctcggcgagcgcatgatgcgtggcaagcgc
ggcgccatcgtcgccatcgagcccgagacgggcgaggtgctggctatggtcacggcgccg
aactatgaccccgcgctgctggcaggtaaggacaagggcagtaaccaccgtatgctcgag
gagagctacgggaagccgctcctgaaccgtgccatacagggtaactaccccccgggctcg
accttcaagcccgcacaaggggcgatcttcctagccgaaggcgtcctctccccctctaca
cctctcagctgctacggcggctatccgcgcctcggtgggaagcctaagtgccacccccac
ggctcgcctatctcgctcgtcccagcactggctacctcctgcaacgcctacttctgctgg
gggatgcacttcctcctagacgaccgcaagcgctatccgagtgtagaggtcgccctcgag
cactggaaggagcgcatcgtgcgcctcggctacggctaccgcctcggcgtagacctccca
ggggagaagcgcggctacatccccaatagcagcgtctacgacaaggcctataagggacgc
tggaattcctctaccatcatctccatctccatcgggcagggcgaagtgctcgccacgccg
ctacagatcgccaaccttgcggccatcatcgccaatcgtggcagctacgtccgtccccat
ctggtgcgccacatctcgggccagcgcctggacacgatgtacacgcagcgccagcagtcg
ggcatctcgcccgagcactgggagtatatcgtgcaggggatggcgcaggccgtcacgggc
ggtacctgccgcgcggccaacttcgcccctggccaagtcgaggtctgcggtaagacgggt
acggccgagaacccgcacggtaaggatcactcggccttcatcggctttgccccccgctcg
cgtccccgcatcgccgtctcggtctatgtggagaatgggggcttcggggcgcactacggc
gtacctatcggccgtgtgatgatggagtactacctacgtgggggcaagctctcgggtgct
ggtgaggccatagcctcgcagatggagcaccgcagcatctcctacctcaacgatctatag
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