Porphyrobacter sp. ULC335: KVF90_02760
Help
Entry
KVF90_02760 CDS
T11728
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
poru Porphyrobacter sp. ULC335
Pathway
poru03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
poru00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KVF90_02760 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poru03021
]
KVF90_02760 (rho)
03019 Messenger RNA biogenesis [BR:
poru03019
]
KVF90_02760 (rho)
Transcription machinery [BR:
poru03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KVF90_02760 (rho)
Messenger RNA biogenesis [BR:
poru03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KVF90_02760 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
Spore_III_AA
ATPase_2
AAA_22
NACHT
AAA_25
S1CSD-TOTE-2
AAA
AAA_14
GpA_ATPase
ResIII
Motif
Other DBs
NCBI-ProteinID:
UYV16275
LinkDB
All DBs
Position
complement(582601..583866)
Genome browser
AA seq
421 aa
AA seq
DB search
MHLKDLKRKTPAELVAMAEELGVEGASTMRRQDLLFSILRELAEDEEYEEKIMGIGTIEV
LQDGFGFLRSPEANYLAGPDDIYVSPNQVRRWGLRTGDTVEGEIRAPREGERYFALTTLT
KVNFDDPDAVRLRTNFDNLTPLYPDQKLNLDTLDPTVKDKSARVIDIIAPQGKGQRALIV
APPRTGKTVLLQNIAKAITDNHPEVFLIVLLVDERPEEVTDMQRSVKGEVISSTFDEPAN
RHVQVAEMVIEKAKRLVEHKHDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQRP
KRFFGAARNIEEGGSLSIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVSDKRIFPA
LDVGKSGTRKEELLVQKDNLSKMWVLRRILMQMGTVDAMEFLLDKMKDSKTNEDFFATMN
Q
NT seq
1266 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcaaggacctcaagcgaaagaccccggccgaattggtcgcaatggcggaagaa
ctcggcgtcgaaggcgcttcgaccatgcgccgccaggatctgctgttcagcatcctgcgc
gaactggccgaggacgaggaatacgaagaaaagatcatgggcatcggcaccatcgaggtg
ctgcaggacggtttcggcttcctgcgctcgcccgaggcgaattaccttgccgggccggac
gatatctatgtctcgcccaaccaggtgcgccgctggggcctgcgcaccggtgacaccgtc
gaaggcgagatccgcgcaccgcgtgaaggtgaacgctattttgcgctgaccaccctcacc
aaggtcaatttcgacgatcccgacgcagtccgtctgcgcaccaatttcgacaacctgacg
ccgctttatccggaccagaagctcaacctcgacaccctcgatccgacggtgaaggacaag
agcgcgcgggtgatcgacatcatcgccccgcagggcaagggccagcgcgcgctgatcgtc
gccccgccgcgcaccggtaagaccgtgctgctgcagaacatcgccaaggcgatcaccgac
aaccatcccgaggtgttcctgatcgtcctgctggtggacgaacgccccgaggaagtcacc
gacatgcagcgttcggtgaagggtgaggtgatctcctcgaccttcgacgaacccgccaac
cgtcacgttcaagtcgctgaaatggtgatcgaaaaggccaaacgcctggtcgagcacaag
catgacgtggtgatcctgctcgactccatcacccgcctcggccgcgcctacaacaccgtt
gtgccgtcctcgggcaaggtgctgaccggcggtgtagacgctaacgcgctccagcgcccg
aagcgcttcttcggcgccgcgcggaacatcgaggaaggtggctccctgtccatcatcgct
accgcgctgatcgacaccggcagccgcatggatgaagtcatcttcgaagagttcaagggc
accggtaactcggaaatcgtcctcgatcgcaaggtgtccgacaagcgcatcttccccgcg
ctggatgtcggcaagtccggcacccgcaaggaagaactgctggtccagaaggacaacctc
agcaagatgtgggtgctgcgccgcatcctgatgcagatgggcaccgtagatgcgatggag
ttcctgctcgacaagatgaaggattccaagaccaacgaggacttcttcgccacgatgaat
caatag
DBGET
integrated database retrieval system
