Porphyrobacter sp. ULC335: KVF90_13460
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Entry
KVF90_13460 CDS
T11728
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
poru Porphyrobacter sp. ULC335
Pathway
poru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
poru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KVF90_13460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
poru03021
]
KVF90_13460
03400 DNA repair and recombination proteins [BR:
poru03400
]
KVF90_13460
Enzymes [BR:
poru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KVF90_13460
Transcription machinery [BR:
poru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KVF90_13460
DNA repair and recombination proteins [BR:
poru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KVF90_13460
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
IDH
HHH_XRCC3_RpoA
Phage_tube_2
Motif
Other DBs
NCBI-ProteinID:
UYV15122
LinkDB
All DBs
Position
complement(2835397..2836452)
Genome browser
AA seq
351 aa
AA seq
DB search
MSVNTKNWQELKKPNSLEIKDGGDRQRKVTFVAEPLERGFGLTLGNALRRVLLSSLQGAA
ITSIKIENVLHEFSSLAGVREDVTDIVLNVKQIALKMEGEGPKRLQLSATGPGEVRAGDI
AVTGDIEVMNKDLVICHLDEGATLNMELTADTGKGYSPAVQNRPADAPIGLIPVDSLYSP
VRQVSYKVENARVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLTLFVHFEDGIP
QPVGQMIGHAVQPEESDANQLNRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKTEAE
MLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaacaccaagaactggcaggaactcaagaaacccaactccctcgaaatcaag
gatggcggcgatcgtcagcgcaaggttaccttcgtggccgaaccgctggagcggggcttc
ggcctgacgctcggcaacgcgctgcgccgggtgctgctttccagccttcagggcgctgcg
atcacctcgatcaagatcgagaacgtgctgcacgaattctcgtcgcttgccggcgtgcgt
gaagacgtcaccgacatcgtcctgaacgtcaagcaaatcgcgctcaagatggaaggcgag
ggccccaagcggctccagctttcggccaccggcccgggcgaagtccgcgctggcgacatc
gctgtcaccggcgacatcgaagtgatgaacaaggatctggtgatctgccatctcgatgaa
ggcgcgacgctcaacatggagctgaccgctgacacgggcaagggctactcgcctgccgtc
cagaaccgtccggccgacgcgccgatcgggctgatcccggttgactcgctttattcgcct
gtgcgtcaggtcagctacaaggtcgaaaacgcccgcgtcggtcaggagcttgactatgac
aagctctcgctgacggtcgagactgatggcactgtcaccccggaagacgccgtggcctat
gccgcgcgcatccttcaggaccagctgacgctgttcgtccacttcgaagacggcatcccg
cagccggtcggccagatgatcggccacgccgtgcagccggaagaaagcgacgccaaccag
ctcaaccgttacctcctcaagaaggtggacgagctggaactgtcggtgcgttcggccaac
tgcctcaagaacgacaacatcatctatatcggcgatctggtccagaagaccgaagccgag
atgctgcgcacgccgaacttcggccgcaagtcgctcaacgagatcaaggaagtgctctcg
agcatgggtctgcgcctcggcatggacatcccgggctggccgcccgagaacatcgaagag
atggccaagaagctcgagcaggaattgctcggttga
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