Porphyrobacter sp. ULC335: KVF90_14655
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Entry
KVF90_14655 CDS
T11728
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
poru Porphyrobacter sp. ULC335
Pathway
poru03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
poru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
KVF90_14655 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
poru03400
]
KVF90_14655 (uvrB)
DNA repair and recombination proteins [BR:
poru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
KVF90_14655 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KVF90_14655 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Microtub_bd
Kinesin
UB2H
DUF87
AAA_19
AAA_22
SRP54
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
UYV15341
LinkDB
All DBs
Position
3063734..3065929
Genome browser
AA seq
731 aa
AA seq
DB search
MAELVIRRGLDEPETGADFTPHRPTRPDKSMGGIPFKLVSEYEPAGDQPTAIAELTQSAL
AGEKTQVLLGVTGSGKTFTMAKVIETLQRPALILAPNKILAAQLYGEFKSFFPENAVEYF
VSYYDYYQPEAYVPRSDTYIEKESSVNEAIDRMRHSATRALLERDDVIIVASVSCLYGIG
SVETYSAMIFDIKVGEVVDQRELIRKLVALQYKRNDAAFTRGCFRVRGDSLEIFPSHYED
MAWRVSFFGDEIEGISEFDPLTGTKGAALEKVRVYANSHYVTPGPTMKQAAAAIKFELEE
RLKELEAEGKLLERQRLEQRTHFDLEMIAATGSCAGIENYSRFLTGRLPGEPPPTLFEYL
PENALLFVDESHQTVPQIGAMAKGDHRRKLTLAEYGFRLPSCIDNRPLRFNEWDAMRPQT
FAVSATPGHWEMDQTGGVFAEQVIRPTGLIDPPVEIRPVEDQVQDCIVECKATAAKGYRT
LVTTLTKRMAEDLTEFMHEAGVRVRYMHSDVETLERIELIRDLRLGVYDVLVGINLLREG
LDIPECGLVTILDADKEGFLRSETSLIQTIGRAARNVDGRVILYADRITGSMERALAETD
RRRSKQEAYNTEHGITPTTIKRNIHDIVAHSAAQDSVLVDTGDPERNNLVGHNLRSYIED
LEKRMRNAAANLEFEEAGRLRDEIRRLEADELGIPDGEKRAPIVGRSNEGKPGTRKTRFG
KTRYKKMGGKP
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggccgaactcgtgatccgcaggggactggacgagcccgaaacgggcgcggacttcacc
ccgcaccgccctacgcgtcccgacaagtcgatgggcggcattccgttcaagctcgtctcg
gaatacgaaccggcgggcgaccagccgaccgcgattgcggaactgacgcaaagcgcgctg
gcgggcgagaagacgcaggtgctgctcggcgtcaccggctcgggcaagaccttcaccatg
gccaaggttatcgagaccttgcagcgccccgccctgatccttgcccccaacaagattctg
gccgcgcagctttacggggagttcaagagcttcttccccgaaaacgcggtcgagtatttc
gtcagctactacgactactaccagcccgaagcctacgtgccgcgctccgatacctatatc
gagaaagagtcgagcgtgaacgaggcgatcgaccggatgcgccattcggccacccgcgcg
ctgctggagcgtgacgatgtgatcatcgtcgcctcggtctcgtgcctttacgggatcgga
tcggtcgagacctattcggcgatgatcttcgatatcaaggtgggcgaggtcgtcgaccag
cgtgaattgatccgcaaactcgtcgcgctgcaatacaagcgcaacgacgccgccttcacg
cgcggctgcttcagggtgcgcggcgacagcctggaaatcttcccctcgcactatgaagac
atggcgtggcgcgtcagcttcttcggtgacgagatcgaggggatcagcgaattcgacccg
ctgaccggcaccaagggggccgcgctggagaaggtgcgggtctatgccaattcgcactac
gtcacgccggggccgacgatgaagcaggcggcggcggccatcaagttcgagctggaagaa
cggctcaaggaactggaggcagagggcaagctgctggaacgccagcggctcgaacagcgc
acccatttcgaccttgagatgatcgccgcgaccggatcatgcgccggcatcgaaaactac
tcgcgcttcctcacgggccgcctcccgggcgaaccgccgccgacgctgttcgaatacctg
cccgaaaatgcgctgctgttcgttgatgaaagccaccagaccgtgccgcagatcggcgcg
atggccaagggtgaccaccgccgcaagctgacgttggccgaatacggcttccgcctgccg
agctgcatcgacaatcgtccgctcaggttcaacgagtgggacgcgatgcgcccgcagacc
tttgcggtctcggcgacgccgggccattgggaaatggaccagaccggcggcgtcttcgcc
gaacaggtgatccgccccaccggcctgatcgaccccccggtcgagatccgcccggtcgag
gatcaggtgcaggactgcatcgtcgaatgcaaggcaaccgccgccaagggctaccgcacg
cttgtcaccacgctcaccaagcgcatggccgaagacctcaccgaattcatgcacgaagcc
ggcgtgcgggtgcgttacatgcactcggacgtggaaacgctcgaacgtatcgagctgatc
cgcgacctgcgcctcggcgtgtacgacgtgctggtcggcatcaaccttctgcgcgaaggc
ctcgacattcccgaatgcgggctggtgacgatcctcgacgccgacaaggaaggctttctg
cgcagcgaaacctcgctgatccagaccattggccgcgccgcgcgcaacgtcgatggccgc
gtgatcctctatgccgaccgcatcaccggcagcatggaacgcgcgctcgccgaaaccgac
cgccgccgatccaagcaggaggcttacaacaccgagcacggcatcacgccaaccacgatc
aagcgcaacatccacgatatcgtcgcgcattcggcggcgcaggattctgtgctggtcgac
accggcgatccggagcgcaacaacctcgtcgggcataacctgcgcagctacatcgaagac
ctcgaaaagcggatgcgcaacgcggcagcgaacctcgagttcgaggaagcgggcagattg
cgcgacgagatccggcgactggaagcggatgaactcggcatccccgacggcgaaaaacgc
gcgccgatcgtcgggcggagcaacgagggcaagccggggacgcgcaagacccgcttcggc
aagacgcgttacaagaagatgggtgggaagccttag
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