KEGG   Pseudomonas oryziphila: EJA05_00405
Entry
EJA05_00405       CDS       T07791                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
pory  Pseudomonas oryziphila
Pathway
pory03030  DNA replication
pory03410  Base excision repair
pory03420  Nucleotide excision repair
pory03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pory00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EJA05_00405 (polA)
   03410 Base excision repair
    EJA05_00405 (polA)
   03420 Nucleotide excision repair
    EJA05_00405 (polA)
   03440 Homologous recombination
    EJA05_00405 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pory03032]
    EJA05_00405 (polA)
   03400 DNA repair and recombination proteins [BR:pory03400]
    EJA05_00405 (polA)
Enzymes [BR:pory01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EJA05_00405 (polA)
DNA replication proteins [BR:pory03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     EJA05_00405 (polA)
DNA repair and recombination proteins [BR:pory03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     EJA05_00405 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     EJA05_00405 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Obc1_cap Prok-E2_E
Other DBs
NCBI-ProteinID: AZL66285
UniProt: A0A3S8UD53
LinkDB
Position
76963..79728
AA seq 921 aa
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAAGRPVIISTGDKDMAQLVDGHVTLVNTMTGSVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLSDVYQNLDKVAGLAIRGAKTLAAKLEEHRDA
AFLSYELATIKCDVELDVEVDALVCGEPDREALLALYTEMEFKSWVAEVQRDAAQAAPKG
AATGPANVLEAPAAKVEPQYETILDQARFDAWLEKLRQAPLFAFDTETTGLDAQKAQLVG
LSFAIEPNVAAYVPLAHDYEGAPAQLDREAVLQALKPLLEDPAKGKIGQNAKYDINILAN
GSPAIQMRGVAYDTMLESYVLNSTASRHDMDSLAQRYLEHTTISFEDIAGKGAKQLTFNQ
IPLEKAGPYAAEDADITLRLHHALQARLAETPSVLPVLMDIEMPLVPVLAKIERQGALVD
AALLGVQSGELGAKMVELEREAFELAGEEFNLGSPKQLGVILYDKLGMPVLSKTAKGQPS
TAEAVLDDLAEQGYPLPKVLMQYRSLSKLKSTYTDKLPGQINPRTGRVHTSYQQAVAATG
RLSSSDPNLQNIPVRTAEGRRIRQAFVASPGYKLLAADYSQIELRIMAHLAKDEGLLHAF
RNDLDVHRATAAEVFGVALEQVTTDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDY
IDRYFARYPGVLAYMERTRAQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAP
MQGTAADIIKRAMVAVDNWLTDSGLDARVILQVHDELVLEVREDLVEQVKDEIRGYMSGA
AELDVPLLVEVGVGSNWDEAH
NT seq 2766 nt   +upstreamnt  +downstreamnt
atgagccaagcgcccctcgtcctggtggacggttcctcctacctctaccgtgccttccac
gcgctgccgccgttgaccacttccaaaggcctgcccaccggcgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcaataccccgacagcctgttcgcggtggtgttcgat
gccaagggcgggaccttccgcgatgccatgttcgccgagtacaaggccaaccgcccaagc
atgcccgacgacctgcgggtgcaggtcgagccgctgcatgccagcgtgcgtgccctgggc
tacccgctgctgtgtgtcgagggtgtggaggccgatgacgtgatcggcaccctggcccgc
agcagcgcggccgccggccggccggtgatcatctcgaccggcgacaaggacatggcccaa
ctggtggacggccacgttacgctggtcaacaccatgaccggtagcgtgctggacgtggct
ggcgtgcacgagaagtttggcgtcggtcccgaacacatcatcgacttcctcgccctgatg
ggcgacaaggtcgacaacatccccggcgtgccgggcgttggcgagaagaccgcggtgggc
ctgttgaccggtatcggtggcgggctgagcgatgtgtaccagaacctggacaaagtcgcg
ggcctggccattcgcggggccaagaccctggccgccaagcttgaggagcatcgcgacgcg
gccttcctttcctacgagctggccaccatcaagtgcgatgtggagctggatgtcgaggtt
gacgccctggtttgcggcgagccggaccgtgaagccttgctggcgttgtacaccgagatg
gagttcaagagctgggtcgccgaggtgcagcgtgatgctgcccaggcagctcccaagggc
gccgccactggccctgccaatgtgctcgaggcacctgcggccaaggtcgagccgcagtac
gaaaccatccttgaccaggcgcgtttcgacgcctggctggagaagctgcgtcaggcaccg
ctgttcgccttcgacaccgaaaccaccggcctcgatgcgcagaaggcgcaactggtcggc
ctgtcgttcgccatcgaacccaatgtggctgcctacgtgcccctggcccacgactatgaa
ggcgcgcctgcccagttggaccgcgaggcagtgctgcaggcgctcaagccgctgctggaa
gacccggccaaaggcaagatcggccagaacgccaagtacgacatcaacatcctggccaac
ggcagccctgccatccagatgcgcggcgtggcctacgacaccatgctcgagtcctacgtg
ctcaattccaccgccagccgtcacgacatggacagcctggcgcagaggtacctcgagcac
accaccatcagcttcgaagacatcgccggcaagggcgccaagcagctgaccttcaaccag
atcccgctggagaaggccggtccctacgccgccgaggacgccgacatcaccctgcgcctg
caccatgccttgcaggcgcggctggccgaaacgccgagcgtgctgccagtgctgatggac
atcgaaatgccgctggtgccggtgctggcgaagatcgagcgccagggcgcgttggtcgat
gccgcgctgcttggggtgcagagcggtgagctgggggcgaagatggtcgagctggagcgc
gaggcgttcgagctggccggcgaggaattcaaccttggctcacccaagcaactgggggtg
atcctctacgacaagctgggcatgccggtgctgagcaagaccgccaagggccagccctcc
accgccgaagccgtgctggacgacctcgccgagcaaggctacccgctgcccaaggtgctg
atgcagtaccgcagcctgagcaagctcaagagcacctacaccgacaagctgccggggcag
atcaacccgcgtaccgggcgtgtgcatacctcttaccagcaggcggtcgccgccaccggg
cgtctgtcgtccagcgacccgaacctgcagaacattcccgtgcgcaccgccgaaggccga
cgcatccgccaggcctttgtcgcaagccccggctacaagctgctggcggcggactattcg
cagatcgagctgcgcatcatggcccacctggccaaggatgaggggctgttgcacgcgttc
cgcaacgacctggacgtgcaccgcgccaccgccgccgaagtcttcggcgtggcgctggag
caagtcaccaccgaccagcgccgcagcgccaaggcgatcaacttcggcctgatctacggc
atgagcgcattcggcctggccaagcagatcggtgtcgaccgcaaacagtcccaggactac
atcgaccgctacttcgcccgttacccgggcgtgctggcctatatggaacgcacccgcgcc
caggcggccgagcagggcttcgtcgaaaccttgttcgggcgccgcctgtacttgccggac
atcaacgccaagaacccggccctgcgcaaaggcgccgaacgcaccgcgatcaacgcgccg
atgcagggcactgcggcggacatcatcaagcgcgccatggtggcggtggacaactggctg
accgacagcgggctggatgcgcgggtgatcctgcaggtgcacgacgaactggtgctggaa
gtgcgcgaagacctggtggagcaggtcaaagatgaaattcgcggctacatgagtggcgcc
gccgagctggacgtgccgctgctggtggaagtgggcgtcggctcgaattgggacgaagct
cactaa

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