KEGG   Pseudomonas oryziphila: EJA05_00460
Entry
EJA05_00460       CDS       T07791                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K11384  two-component system, NtrC family, response regulator AlgB
Organism
pory  Pseudomonas oryziphila
Pathway
pory02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pory00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EJA05_00460
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:pory02022]
    EJA05_00460
Two-component system [BR:pory02022]
 NtrC family
  KinB-AlgB (alginate production)
   EJA05_00460
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 AAA Mg_chelatase VpsR HTH_23 cREC_REC AAA_22 AAA_16 HTH_29 AAA_19 AAA_2 Xre-like-HTH MCM nSTAND3 HTH_38 HTH_17
Other DBs
NCBI-ProteinID: AZL66296
UniProt: A0A3Q8TY18
LinkDB
Position
complement(90621..91967)
AA seq 448 aa
MESAQDNQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQAEALLQRQVFDLCFLDL
RLGEDNGLDVLAQMRVQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGELRKPKDGLDSHSPAMMAVLETARQVATTDANILILGESGTG
KGELARAIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLDEMVRENRF
REDLLYRLNVITLHLPPLRERSDDILTLAERFLARFVKEYSRPARGFSDEARTALLNYRW
PGNIRELRNVVERASIICPQERVEISHLGMGEQPTGNAPRVGAALSLDELERAHIAAVLA
ASDTLDQAAKTLGIDASTLYRKRKQFNL
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaatcagcccaggacaaccaaggccgcattctgctggtggacgatgagtccgccatc
ctgcgtaccttccgctactgcctcgaggacgagggctatagcgtggccaccgccaacagt
gccgcccaggccgaggccctgctgcagcgccaggtgttcgacctgtgcttcctcgatttg
cgcctgggcgaggacaacggcctcgatgtgctggcgcagatgcgcgtccaggccccctgg
atgcgcgtggtgatcgtcactgcccattcggcgatcgataccgcagtggacgcgatccag
gccggcgccgccgactacctggtcaaaccctgcagccctgaccaactgcgcctggctacc
gccaagcaactggaagtgcgccagctgtcggcgcgcctggaagccctggagggcgagctg
cgcaaacccaaggacggcctcgactcccacagcccggccatgatggccgtactggaaacc
gcccggcaggtggcgaccaccgacgccaacatcctcatcctcggcgagtcgggcaccggc
aagggcgagctggcccgcgccatccatggctggagcaagcgcgcgcgcaaggcctgcgtg
accatcaactgcccatcgctgaatgccgagctgatggagagcgagctgttcggccacacc
cggggcgccttcaccggcgccagcgaaagcacccttgggcgagtcagccaggctgacggc
ggcaccttgttcctcgacgagatcggcgattttcccctcacgttgcagccgaaactgttg
cgtttcatccaggacaaggaatacgaacgggtcggcgacccggtcacccgccgtgccgat
gtgcgcatcctggcggcgactaacctcaacctggacgagatggtccgcgagaaccgtttc
cgtgaagacctgctctatcgcctgaacgtgatcaccttgcacctgccaccgctgcgtgag
cgcagcgacgacatcctgaccctggccgagcgcttcctcgcccgcttcgtcaaagaatat
tcacgcccagcccgtggtttcagcgacgaagcccgcaccgcactgctcaactatcgctgg
ccaggcaacatccgtgagttgcgcaacgtggtcgagcgcgccagcatcatctgcccgcag
gagcgcgtggaaatcagccacctgggcatgggcgagcagcccaccggcaacgcgcccagg
gtcggcgccgcactgagcctggacgaactggagcgcgcccatatcgcggcagtgctggcg
gccagcgacaccctcgaccaggccgccaagaccctgggcatcgatgcctccacgctgtac
cgcaagcgcaagcagttcaacctgtga

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