Pseudomonas oryziphila: EJA05_02690
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Entry
EJA05_02690 CDS
T07791
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
pory
Pseudomonas oryziphila
Pathway
pory03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJA05_02690 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pory03400
]
EJA05_02690 (uvrA)
DNA repair and recombination proteins [BR:
pory03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJA05_02690 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJA05_02690 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
nSTAND1
AAA_29
AAA_16
AAA_23
RsgA_GTPase
BCA_ABC_TP_C
DnaJ_CXXCXGXG
nSTAND3
Viral_helicase1
AAA_25
cobW
Motif
Other DBs
NCBI-ProteinID:
AZL71386
UniProt:
A0A3S8USU7
LinkDB
All DBs
Position
complement(546381..549266)
Genome browser
AA seq
961 aa
AA seq
DB search
MAARRILLCLCPPSEAAVDKILIRGARTHNLKNIDLTLPRDKLIVITGLSGSGKSSLAFD
TLYAEGQRRYVESLSAYARQFLSMMEKPDVDTIEGLSPAISIEQKSTSHNPRSTVGTITE
IYDYLRLLYARVGTPRCPDHDIPLEAQTISQMVDLVLENPEGSKLMLLAPVVRERKGEHL
AVFDELRAQGFVRARVNGKLYELDELPKLDKQKKHSIDVVVDRFKVRADLQQRLAESFET
ALKLADGIALVAPMDDEDGEETIFSARFACPICGHAISELEPKLFSFNNPAGACPTCDGL
GVKQFFDTKRLVNSELTLAEGAIRGWDRRNVYYFQMLGSLAAHYGFSLEQPFGELSAEDQ
KVILHGSGKQSVDFKYLNDRGDIVKRSHPFEGIVPNLERRYRETESATVREELAKFLGTQ
PCPDCRGTRLRREARHVWVGEKTLPAVTNLPIGEASNYFSDLTLTGRRGEIAAKILKEIC
ERLQFLVNVGLDYLTLDRSADTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDN
DRLLATLNHLRDLGNTVIVVEHDEDAIRLADYVVDIGPGAGVHGGQIVAEGTPDEVMAHP
DSLTGKYLSGRKKIVVPAKRTPRNKKLSLKLKGARGNNLQNVDLELPIGLLTCVTGVSGS
GKSTLINNTLFPLAATALNGASTLEPAPHSSIDGLQHLDKVVDIDQSPIGRTPRSNPATY
TGIFTPIRELFAGVPEARSRGYGPGRFSFNVKGGRCEACQGDGLIKVEMHFLPDIYVPCD
VCKSKRYNRETLEIKYKGKNIHEVLEMTIEDARGFFDAVPALARKLQTLMDVGLSYIKLG
QSATTLSGGEAQRVKLSRELSKRDTGKTLYILDEPTTGLHFADIQQLLDVLHRLRDHGNT
VVVIEHNLDVIKTADWLVDLGPEGGSKGGQIIAVGTPEELAEKQQSYTGHYLKPLLERDR
A
NT seq
2886 nt
NT seq
+upstream
nt +downstream
nt
ctggcagcgcgccgtatactcctttgtttatgcccgccgagcgaggccgcagtggacaag
atcctgattcgtggggcacgtacccacaacctgaagaacatcgacctcacgctaccgcgg
gacaagctgatcgtgatcaccggcctgtccggctccggcaagtcgtcgctggcgttcgac
acgctgtatgccgagggccagcgccgctatgtggaatcgctgtcggcctacgcccggcag
ttcctgtcgatgatggaaaagcccgacgtcgacaccatcgaaggcctgtcgccggcgatt
tccatcgagcagaagtccacctcgcacaacccgcgctccaccgtgggcaccatcaccgag
atctacgactacctgcgcctgctctatgcgcgggtgggcacgccgcgctgcccggaccac
gacatcccgctggaagcgcaaacgatcagccagatggtcgacctggtgctggaaaacccc
gaaggcagcaagctgatgctgctggcaccggtggtccgcgagcgcaagggtgagcacctg
gcggtgttcgacgaattgcgcgcccagggcttcgtgcgtgcgcgggtcaacggcaagctc
tacgagctggacgaactgcccaagctggacaagcagaagaagcacagcatcgatgtggtg
gtagaccgcttcaaggtgcgtgccgacctgcaacagcgcctggccgagtcgttcgagacc
gcgctaaagctggcggacggcatcgccctggtagcgccgatggatgacgaggacggcgaa
gagacgatcttctccgcgcgcttcgcctgcccgatctgcggccatgcgatcagcgagctg
gaaccgaagctgttctccttcaacaacccggccggcgcctgcccgacctgcgatggcctg
ggggtgaagcagttcttcgataccaagcgcctggtcaacagcgagctgaccctggccgag
ggggcgatacgcggctgggaccggcgtaacgtctactacttccagatgctcggttcgctg
gcggcgcactatggcttcagccttgagcagccgttcggcgagctttcggccgaggaccag
aaggtcatcctgcacggcagcggcaagcaaagcgtcgacttcaagtacctcaacgaccgg
ggcgatatcgtcaagcgctcgcacccgttcgaaggcatcgtgcccaacctcgagcgccgc
taccgcgagaccgagtcggccaccgtgcgcgaagagctggccaagttccttggcacccag
ccctgccccgactgccgcggcacccgcctgcgccgtgaggcgcggcatgtgtgggtgggc
gagaagaccctgccggcggtgaccaacctgccgatcggtgaagccagcaactacttcagc
gacctgaccctgaccggccgccgtggcgagatcgcggcgaagatcctcaaggagatctgc
gagcgcctgcagttcctggtcaacgtcggcctcgactacctgaccctcgaccgcagcgcc
gacaccctgtccggcggcgaggcccagcggatccgcctggccagccagatcggcgccggc
ctggtgggcgtcatgtacatcctcgatgaaccgtccatcggccttcatcaacgggacaac
gaccgcctgctggccaccctcaaccacctgcgcgacctgggcaacacggtgatcgtggtg
gagcacgacgaggatgccatccgcctggccgactacgtggtggatatcggccctggggcc
ggcgtgcatggcgggcagatcgtcgccgaaggcacaccggacgaggtgatggcgcacccc
gattcgctgaccggcaagtacctgtccgggcgcaagaagatcgtcgtgccggccaagcgc
accccgcgcaacaagaagctgtcgctcaagctcaagggcgcgcgcggcaacaacctgcag
aacgtcgacctggaactgccgattggccttttgacctgcgtgaccggtgtgtccggctcg
ggtaaatcgacgctgatcaacaacaccctgttccccctggcggccaccgcgctcaacggt
gccagcaccctggagccggcgccgcacagcagcatcgatggcctgcaacacctggacaag
gtggtcgatatcgaccagagcccgatcggtcgcacgccgcgttcaaacccggcgacctat
accggcatcttcacaccgatccgtgagctgttcgccggtgtgccggaggcgcgctcccgt
ggctatggcccggggcgcttctcgttcaacgtcaagggcgggcgctgcgaggcgtgccag
ggcgacggcctgatcaaggtggaaatgcacttcctgccggacatctacgtgccgtgcgat
gtgtgcaagagcaagcgctataaccgcgaaaccctggagatcaagtacaagggcaagaac
atccacgaggtgctggaaatgaccatcgaggatgcccgtgggttcttcgacgcggtgcca
gcactggcgcgcaagctgcagacgctgatggacgtggggctttcctacatcaagctgggg
cagtcagccaccacgctgtcgggcggcgaggcgcagcgggtcaagctgtcgcgcgagctg
tccaagcgcgataccggcaagaccctgtacatcctcgacgagccgaccacaggcttgcac
ttcgccgatatccagcaactgctggacgtgctgcatcgtctgcgcgaccacggcaacacc
gtggtggtcatcgagcacaacctggatgtgatcaagacggcggactggttggtggacctg
gggccggagggtggctccaagggcgggcagatcattgccgtcggtacgcccgaagagctg
gccgagaagcagcagtcctataccgggcactatctgaaaccactgctggagcgagatcga
gcctga
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