Pseudomonas oryziphila: EJA05_02750
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Entry
EJA05_02750 CDS
T07791
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pory
Pseudomonas oryziphila
Pathway
pory02025
Biofilm formation - Pseudomonas aeruginosa
pory03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
EJA05_02750 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EJA05_02750 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pory02044
]
EJA05_02750 (tssH)
Secretion system [BR:
pory02044
]
Type VI secretion system
Imp/Vas secretion system core components
EJA05_02750 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
AAA_5
ClpB_D2-small
AAA_22
AAA_16
nSTAND3
AAA_7
Sigma54_activat
Clp_N
TniB
NACHT
AAA_24
NBD_SMAX1
Hpr_kinase_C
DUF5401
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AZL66723
UniProt:
A0A3S8UEI3
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All DBs
Position
563062..565680
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AA seq
872 aa
AA seq
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MINVDLQQLVQALDADSRRDLERSAERCVARGGSKILIEDLLLGLLERPDSLLQRALQDA
AIDTGAFSAALQPNVEHSATRNPVFAPELVQWLQDALLVSNLELGQSQVDQAALILGLLR
NPLRYAGSRYHKLLGGVDIERLKGYALAQQPAAAKAPGAPQGESMLQRFTHNLTQQARDG
KLDPVLCRDASIRQMIDILARRRKNNPIVVGEAGVGKTAVVEGLAARIVAGEVPPALQGV
DLLALDMGLLQAGASVKGEFERRLKGVIDEVKAAPRPVILFIDEAHTLIGAGGNAGGSDA
ANLLKPALARGELRTIAATTWAEYKKYFEKDPALARRFQPVQLLEPTVGEAVTILRGLAQ
LYEKSHGIYLRDDAVVAAAELSARYLTGRQLPDKAVDVLDTACARVRISLAAAPDSLERL
RAELAEGERQRNALRRDAEAGLAIDHEAFAALEQRLAEAHGQEIELAARWARQRELAEQV
LELRQQVANAAVAPAEQAEGEEGESVVEGESREHLQQRLAETHQALLDAQAEERLVSAEV
CPRLVAEVISAWTGVPLSQLAREHNAKVITFADDLRARIRGQEQAVHALNRSMRATAAGL
NKPDAPVGVFLLVGPSGVGKTETALALADLLYGGDRFITTINMSEFQEKHTVSRLIGAPP
GYVGYGEGGMLTEAVRQKPYSVVLLDEVEKADPDVLNLFYQIFDKGVANDGEGRQIDFRN
TLILMTSNLASDQISALCENGERPDAELLEQHIRPALSRHFKPALLARMRVVPYYPVGGP
VLRELIEIKLGRLGERLQRRQLGFSHCQALVDHLAERCSQSEAGARLIDHLIDTHVLPKV
ADRLLDAMASGEAISRVHATLDGDAGVTCEFA
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgatcaacgtagacctgcaacaactcgtccaggccctggacgccgacagccgccgcgac
cttgaacgttccgccgagcgctgcgtcgcccgcggcggcagcaagatcctcatcgaggac
ctgctgctgggcctgctcgagcgccccgacagcctgttgcagcgtgcgctgcaggacgcc
gcgatcgataccggcgcgttcagcgccgcgctgcaacccaacgtcgagcacagcgccacc
cgcaacccggtgtttgccccggagctggtgcagtggctgcaggacgcgttgctggtctcc
aacctcgagctgggccagagccaggtcgaccaggccgcgctgatcctcggcctgctgcgc
aacccgctgcgctatgccggcagccgctatcacaagctgctcggcggcgtggatatcgaa
cgcctcaagggctacgccctggcccagcaaccggccgccgccaaggcccccggcgcgccc
cagggcgaatcgatgttgcagcgcttcacccacaacctcacccagcaggcccgtgacggc
aagctcgacccggtactgtgccgcgacgcgtcgatccgccagatgatcgatatcctcgct
cgccggcgcaagaacaacccgatcgtggtcggcgaagccggcgtgggcaagaccgccgtg
gtcgaaggcctggccgcgcgcatcgtcgccggcgaagtgccgccggccctgcaaggggtc
gacctgctggcgctggacatgggcctgctgcaggctggcgccagcgtcaaaggtgagttc
gagcgccgcctcaagggtgtgatcgacgaggtcaaggccgcgccgcgcccggtgatcctg
ttcatcgacgaagcccacaccctgatcggcgccggcggtaacgccggtggctccgacgcc
gccaacctgctcaagccagccctggcccgtggcgagctgcgcaccatcgccgccaccact
tgggccgagtacaagaagtacttcgagaaagacccggccctggcccgtcgcttccagccg
gtgcaactgctcgagcccaccgtgggcgaggcggtgaccatcctgcgtggcctggcccag
ctgtacgaaaagagccacggcatctacctgcgcgacgacgccgtggtcgccgccgccgaa
ctgtcggcgcgctacctgaccggccggcaactgcccgacaaggccgtcgacgtgctcgac
accgcctgcgcccgggtgcgcatcagcctggctgccgcccccgacagcctcgagcgcctg
cgcgccgaactggccgagggcgaacgccagcgcaatgccctgcgccgtgacgccgaggcg
ggcctggccatcgaccacgaggccttcgccgccctcgagcagcgcctggccgaagcccac
gggcaagagatcgaattggccgcccgctgggcccgtcagcgtgagctggccgagcaggta
ctggagctgcgccagcaggttgccaacgccgccgtcgcaccggccgaacaggccgaaggg
gaggagggcgagtccgtcgtcgaaggcgaaagccgcgaacatttgcaacaacgcctggcc
gagacccatcaggccctgctcgacgcccaggccgaagaacgcctggtcagcgccgaagtg
tgcccgcgcctggtggccgaagtgatcagcgcctggaccggcgtgccgctgagccagctg
gcccgcgagcacaacgccaaggtgatcaccttcgccgacgacctgcgcgcccgcatccgt
ggccaggagcaggccgtgcatgcgctcaaccgctccatgcgcgccaccgccgccggcctg
aacaaacccgacgcaccggtgggcgtgttcctgctggtcggccccagcggcgtcggcaag
accgagaccgcgctggcgctggccgacctgctgtacggcggcgaccgcttcatcaccacc
atcaacatgtccgagttccaggagaagcacaccgtctcgcgcttgatcggcgcgccgccc
ggctacgtcggttacggcgaaggcggcatgctcaccgaagcggtgcgccagaagccgtat
tcggtggtgctgctggacgaggtggagaaggccgacccggacgtgctcaacctgttctac
cagatcttcgacaagggcgtggccaacgacggcgaaggccgccagatcgattttcgcaac
acgctgatcctgatgacctccaacctggccagcgaccagatcagcgccctgtgcgaaaac
ggcgagcgccctgacgccgagctgctcgaacagcacatccgcccggcgctcagccgccac
ttcaagccggcgctgctggcgcgcatgcgcgtggtgccgtactacccggtgggcggcccg
gtgctgcgcgagctgatcgaaatcaagctgggccgcctgggcgagcgtttgcagcgtcgg
caactggggttcagccactgccaggcgctggtcgaccacctggccgagcgctgcagccag
agcgaagccggcgcgcgcctgatcgaccacctgatcgacacccacgtgctgcccaaggtc
gccgaccgcctgctcgacgccatggccagcggcgaggcgatcagccgcgtacacgccacc
ctcgacggggatgccggcgtgacctgcgagttcgcctga
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