Pseudomonas oryziphila: EJA05_03930
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Entry
EJA05_03930 CDS
T07791
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pory
Pseudomonas oryziphila
Pathway
pory03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJA05_03930 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pory03019
]
EJA05_03930 (pnp)
03016 Transfer RNA biogenesis [BR:
pory03016
]
EJA05_03930 (pnp)
Enzymes [BR:
pory01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
EJA05_03930 (pnp)
Messenger RNA biogenesis [BR:
pory03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EJA05_03930 (pnp)
Transfer RNA biogenesis [BR:
pory03016
]
Prokaryotic type
tRNA degradation factors
EJA05_03930 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
TraK_C
OB_RRP5_4th
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AZL66936
UniProt:
A0A3Q8TY10
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All DBs
Position
826761..828866
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AA seq
701 aa
AA seq
DB search
MNPVIKQFQFGQSTVTLETGRIARQATGAVLVTVDNDVTVLVTVVGAKQADPSKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDIAAMIGTSAALAISGIPFEGPIGAARVAFHESTGYLLNPTYEQQAASSLDMVV
AGTADAVLMVESEAKELTEDQMLGAVLFAHDEFQAVIKAVKELAAEAAKPTWDWKPAVAN
TALFDAIRAEFGEAVSQGYTITVKADRYARLGELRDQAVAKFSGEEGQPSAGEVKDIFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKINGITEEIMEIALGQALEARLNILGQMNQ
IIGQSRTELSANAPTMIAMKIDTDKIRDVIGKGGATIRGICEETKASIDIEDDGSIKIFG
ETKEAAEAAKQRILGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagcaattccagttcggtcaatcgaccgttaccctcgaaacgggc
cgcattgcccgtcaggccaccggcgctgtgctggtcaccgtcgacaacgatgtcaccgtg
ctggtgaccgtggtcggtgccaagcaggcagacccgagcaagggcttcttcccgctgtcc
gtgcactaccaggaaaagacctacgccgctggcaagatcccaggtggtttcttcaagcgt
gaaggccgcccatccgaaaaagaaaccctgacttcgcgcctgatcgaccgcccgatccgc
ccgctgttcccagaaggtttcatgaacgaagtgcaggtcgtctgcaccgtggtttccacc
agcaagaagaccgatccggacatcgctgcgatgatcggtacctcggctgccctggccatt
tccggcattccgttcgaaggcccgatcggcgccgcccgcgttgccttccacgaaagcacc
ggctacctgctgaacccgacctacgagcagcaggccgcttcgagcctggacatggtcgta
gccggtaccgccgatgccgtactgatggttgaatcggaagccaaagagctgaccgaagac
cagatgctgggcgccgtgctgttcgcccacgacgaattccaggccgtgatcaaggctgtc
aaagagctggctgccgaagccgccaagccgacctgggactggaaaccggccgttgccaac
accgcgctgttcgacgccatccgcgccgagttcggcgaggcggtctcccagggctacacc
atcaccgtcaaggccgaccgttacgcgcgcctgggcgagctgcgcgaccaggcggttgcc
aagttctccggtgaagaaggccagccatcggccggcgaagtcaaagacatcttcggcgag
atcgaataccgcaccgttcgcgaaaacatcgtcaacggcaagccacgtatcgacggccgc
gacaccaagaccgtgcgcccgctgaacatcgaagtcggcgtactgccgaagacccacggt
tcggccctgttcacccgtggcgaaacccaggccctggtggttgccaccctcggcaccgcg
cgtgacgcccagctgctggacaccctcgaaggcgagaagaaagaccccttcatgctgcac
tacaacttcccaccgttctcggtaggcgagtgtggccgcatgggcggtgctggccgtcgc
gaaatcggtcacggccgtctggcccgtcgttcggtccaggccatgctgccggccgctgac
gtgttcccgtacaccatccgcgtcgtatcggaaatcaccgagtccaacggctccagctcc
atggcttcggtctgtggcgcttccctggccctgatggacgctggtgtgccgatgaaagca
ccggtggccggtatcgccatgggcctggtcaaggaaggcgagaagttcgccattctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaggtagccggtaccgcc
aaaggtgttaccgcgctgcagatggacatcaagatcaacggcatcaccgaagagatcatg
gaaatcgccctgggccaggccctggaagcgcgcctgaacatcctcggccagatgaaccag
atcattggccagtcgcgcaccgagctgtcggccaacgcaccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtcatcggtaaaggcggcgccaccatccgcggcatc
tgtgaagaaaccaaggcttcgatcgacatcgaagacgacggttcgatcaagatcttcggc
gaaaccaaggaagcggctgaagctgccaagcagcgcatcctgggcattaccgcagaagcc
gaaatcggcaagatctatgtcggtaaggtcgagcgtatcgtcgacttcggcgccttcgtc
aacatcctgccgggcaaggacggcctggtgcacatctccatgctcagcgatgcgcgtgta
gagaaggtcaccgacatcctgaaggaaggccaggaagtcgaagttctggtactggacgtg
gacaaccgcggccgtatcaagctgtcgatcaaagacgttgccgctgccaaggcatcgggc
gtctaa
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