Pseudomonas oryziphila: EJA05_05355
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Entry
EJA05_05355 CDS
T07791
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
pory
Pseudomonas oryziphila
Pathway
pory02020
Two-component system
pory02024
Quorum sensing
pory02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJA05_05355
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EJA05_05355
02025 Biofilm formation - Pseudomonas aeruginosa
EJA05_05355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pory03000
]
EJA05_05355
Transcription factors [BR:
pory03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
EJA05_05355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HTH_24
HTH_3
MarR_2
HTH_11
MarR
GntR
HTH_23
Sigma70_r4
HTH_19
HTH_36
Motif
Other DBs
NCBI-ProteinID:
AZL67198
UniProt:
A0A3S8UFV8
LinkDB
All DBs
Position
1126015..1126701
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AA seq
228 aa
AA seq
DB search
MHDLRTHLLHGQWFRQLPTKVQDSLLALARTRELAPGQCLFQRGDAPCGLYAVLDGAMRV
GAVSSEGKEALLTLVEAPYWFGEISLFDGQPRTHDAFAEGATRLLWLPQAPLLEWLAREP
QHWRELALLMSHKLRWVFVALEQQSLLAAAPRVAHRLLQIAEGYGERDIAQWRLQLSQEQ
LALMLSLSRQTINQILRNLEQSGVLRLGYGEVEIVDAPRLRAMAQHPG
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatctgcgtacccatttgctgcacggccaatggttccggcagttgcccaccaag
gttcaggatagcctgctggccctggcgcgaacccgcgagctggcgccagggcaatgcctg
ttccagcgtggcgatgcgccgtgcgggctgtatgcggtgctcgacggggcgatgcgggtg
ggggcggtgagcagcgagggcaaggaggcgctgttgaccttggtcgaagcgccgtactgg
ttcggcgagatcagcctgttcgatggccagccacgcacccatgacgccttcgcggaaggg
gctacacgattgctgtggctgccccaggcgcctttgctcgagtggttggcccgtgaaccg
cagcactggcgcgagttggcgttgctgatgagccacaagttgcgctgggtattcgtcgcc
ctggagcagcagagcctgctggccgcagcgccccgggtcgcccaccgcctgctgcagatc
gccgagggctatggcgagcgcgatatcgcccagtggcgcctgcaactgtcccaggagcag
ctggcgctgatgctgtcgctgtcgcgccagaccatcaaccagatcctcaggaacctcgaa
cagtccggcgtgctacgcctgggctatggcgaggtggagattgtcgatgcgccgcggctg
cgggcaatggctcagcatccaggctga
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