Pseudomonas oryziphila: EJA05_07605
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Entry
EJA05_07605 CDS
T07791
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pory
Pseudomonas oryziphila
Pathway
pory00521
Streptomycin biosynthesis
pory00523
Polyketide sugar unit biosynthesis
pory00525
Acarbose and validamycin biosynthesis
pory00541
Biosynthesis of various nucleotide sugars
pory01100
Metabolic pathways
pory01110
Biosynthesis of secondary metabolites
pory01250
Biosynthesis of nucleotide sugars
Module
pory_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EJA05_07605 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EJA05_07605 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
EJA05_07605 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EJA05_07605 (rfbB)
00525 Acarbose and validamycin biosynthesis
EJA05_07605 (rfbB)
Enzymes [BR:
pory01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
EJA05_07605 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
3Beta_HSD
adh_short
Motif
Other DBs
NCBI-ProteinID:
AZL67618
UniProt:
A0A3S8UH19
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All DBs
Position
1617414..1618475
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AA seq
353 aa
AA seq
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MILVTGGAGFIGSNFVLDWLAHCDEPIINLDALTYAGNLENLADLKGDERHVFVHDDICN
RTGVDDLLARYRPRAIVHFAAESHVDRSIHGPEAFMRTNVDGTYTLLEAARNYWQGLTEV
DRAAFRFLHVSTDEVYGSLGPNDAPFVETRAYEPNSPYSASKAASDHLVRAWHHTYGLPV
ITTNCSNNYGPYHFPEKLIPLVITHALAGKPLPIYGDGMQVRDWLYVKDHCSAIRRVLEA
GVPGETYNVGGWNEKPNIEIVHTLCDLLDELQPDANGSYRRLITHISDRPGHDRRYAIDA
RKIERLLGWRPAETFETGIRKTVQWYLANADWVANVQSGTYRQWIQMHYEEHA
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgattcttgttactgggggggcgggtttcatcgggtccaattttgtgctcgattggctt
gcccattgcgatgaaccgatcatcaacctcgatgcgcttacatacgctggaaacctggaa
aacctggccgacctaaagggagatgagcgtcatgtctttgttcatgacgacatctgcaat
cggaccggtgtggatgatttgttggcgcgttaccggccccgagccattgtgcattttgct
gctgaaagccatgttgatcgctccatccatggaccggaagcattcatgcgcaccaatgtt
gatgggacttatacgttgcttgaagctgcgcgtaactattggcaggggttgaccgaggtt
gaccgtgcagcgttccgttttttgcatgtttccactgatgaggtttatgggtcactgggg
ccgaatgacgcgccttttgtcgaaacgcgcgcctatgaacccaatagcccttattcggcc
agtaaggcggcaagcgaccatttggttcgtgcctggcaccatacctacggtcttccggta
atcactaccaattgctcgaacaattatgggccttaccatttcccggaaaaattgatcccc
ttggtcatcactcacgcactggcgggaaaaccattgcccatttatggcgatggcatgcaa
gtacgtgactggctgtatgtgaaagaccattgttctgcaatccgcagggtgttggaagcg
ggcgtgcccggtgagacttacaatgttggcggatggaatgaaaaacccaacattgaaatc
gtgcatacgttatgtgatctgttggacgaacttcagcctgacgcgaatggcagttaccgg
cgtctgattacgcacattagcgatcggccggggcatgatcggcgttatgccatcgacgcg
cgcaagatcgagcggttgttgggctggcggccagccgaaacgttcgaaaccggtattcga
aagactgtccagtggtatctggccaacgccgattgggttgctaatgttcagagcggtacc
tatcgccaatggattcaaatgcattacgaggaacacgcatga
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