Pseudomonas oryziphila: EJA05_08220
Help
Entry
EJA05_08220 CDS
T07791
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pory
Pseudomonas oryziphila
Pathway
pory03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EJA05_08220 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pory03400
]
EJA05_08220 (uvrB)
DNA repair and recombination proteins [BR:
pory03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EJA05_08220 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EJA05_08220 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
Viral_helicase1
DUF3201
Motif
Other DBs
NCBI-ProteinID:
AZL67729
UniProt:
A0A3Q8TZT3
LinkDB
All DBs
Position
1729889..1731904
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFQPAGDQPEAIRQMVEGIEAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNAVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERRDAIIVTTVSCIYGLGSPEAYLKMVLHVDRGDQLDQRALLRRLTELQY
TRNEMDFARATFRVRGDVIDVFPAESDLEAIRIELFDDEVENIAAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAVEGIKEELKERLEYLHKHNKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPAGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRMPSALDNRPMRFDEWEAVSPQTIFVSATPGPYEAEHAGRVVEQVVRPTGLVDPQ
VEVRPALTQVDDLLSEIGKRVALGERVLATTLTKRMAEDLTDYLADHDVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGKAILYADNITGSMQRAIDETERRRDKQVAFNTANGIVPKGVVKDITDIMEGATV
PGARSKKRKGMAKAAEEAGRYEVELQTPAEITKRIKQLEEKMFQFARDLEFEAAAQLRDE
IGKLRERLIAS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagttccagctcgtcacccgattccagccggccggcgaccagcccgaggccatc
cgccagatggtcgaaggcatcgaggccgggctttcgcaccagacgctgctgggcgtgacc
ggctcgggcaagaccttcagcatcgccaacgtgatccagcaggtgcagcgcccgaccttg
gtgctggcgccgaacaagaccctggcggcgcagctttacggcgagttcaaggcgttcttc
ccgaacaacgcggtcgagtacttcgtctcctactacgactactaccagcccgaggcctac
gtgccgtcgtcggacaccttcatcgagaaggacgcctcgatcaacgaccatatcgagcag
atgcgtctgtctgcgaccaaggcgctgctggagcggcgcgacgcgatcatcgtcaccacc
gtatcgtgcatctatggcctgggcagccccgaggcgtacctgaagatggtcctgcacgtc
gaccgtggcgaccaactcgaccagcgtgcgttgctgcgccgcctgaccgagctgcagtac
acccgcaacgagatggacttcgcccgcgccaccttccgtgtgcgcggcgatgtgatcgac
gtgttcccggccgaatcggacctggaggccatccgcatcgaactgttcgatgacgaggtg
gagaacatcgccgccttcgacccgctgaccggcgaggtgatccgcaagctgccgcgcttc
accttctaccccaagtcgcactacgtcacgccgcgcgaaacgctgctcgaagcggtggag
ggcatcaaggaagagctcaaggagcgcctggagtacctgcacaagcacaacaagctggtc
gaggcccagcgcctggagcagcgcacccgcttcgacctggagatgatcctcgaactgggc
tactgcaacggcatcgaaaactactcgcgctacctttccgggcgcccggccggagcgccg
ccacccacgctgtacgactacctgccggcggatgcactgctggtgatcgacgaatcccac
gtttccgtaccccaggtcggcgccatgtacaaaggcgaccgctcgcgcaaggaaacactg
gtggagtacggcttccgcatgccatcggcattggacaaccgccccatgcgcttcgacgag
tgggaggcggtcagcccgcagaccatcttcgtgtccgcaacgcccggcccttacgaagcc
gagcacgccgggcgcgtggtcgagcaggtggtgcgccccaccggcctggtcgacccgcag
gtcgaagtgcgccctgcgctaacccaggtcgacgacctgctgtcggaaatcggcaagcgc
gtcgccttgggcgagcgggtgctggccaccaccctgaccaagcgcatggccgaagacctc
accgactacctggccgatcacgatgtgcgggtgcgctacctgcactcggacatcgacacc
gtcgagcgggtggagatcatccgcgacctgcgcctgggcaccttcgacgtattggtgggc
atcaacctgctgcgcgaaggcctggacatgccggaagtgtcgctggtggccatcctcgat
gccgacaaggaaggcttcctgcgttccgagcgttcgctgatccagaccattggccgtgcg
gcgcgcaacctcaacggcaaggcaatcctctacgccgacaacatcaccggttccatgcag
cgcgccatcgacgagaccgagcggcgccgggacaagcaggtggcgttcaacactgccaat
ggcatcgtgcccaagggggtggtcaaggacatcaccgacatcatggaaggtgccaccgtg
cccggtgcgcgcagcaagaagcgcaagggcatggccaaggcggcggaggaggccgggcgt
tacgaagtcgagttgcagactccggccgagatcaccaagcgtatcaagcagttggaagag
aagatgttccagttcgcccgcgacctggagttcgaggctgccgcgcagttgcgcgacgag
atcggcaagctgcgcgagcgcctgatcgctagttga
DBGET
integrated database retrieval system
