Pseudomonas oryziphila: EJA05_08515
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Entry
EJA05_08515 CDS
T07791
Name
(GenBank) chromosome segregation protein SMC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pory
Pseudomonas oryziphila
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pory03400
]
EJA05_08515
DNA repair and recombination proteins [BR:
pory03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EJA05_08515
Archaeal homologous recombinant proteins
EJA05_08515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
ABC_tran
MMR_HSR1
nSTAND3
AAA_22
AAA_18
RsgA_GTPase
AAA_15
cobW
Motif
Other DBs
NCBI-ProteinID:
AZL67777
UniProt:
A0A3S8UHJ1
LinkDB
All DBs
Position
complement(1790760..1794404)
Genome browser
AA seq
1214 aa
AA seq
DB search
MKILAIRLKNLASLAGPIDIDFTAEPLASAGLFAITGPTGAGKSTLLDALCLALFGTVPR
LNDIAREAKVPDADGDIPTSDPRNLLRRGTGSGFAEVDFVGIDGSRYRARWEANRAREKA
NGKLQNSRQSLYDLDSEQLLGSGKNEYKQLIEARLGLNFEQFTRAVMLAQSEFGAFLKAD
DKERSELLEKLTNTAIYTRLGQRAFSKARETGERHNDLKKQAEHLLPMASDARALLDQQL
DQAQQQFKADQARQRQLEQQRVWFDEQRQLQAQHGEAHAALQAAEHNWQQLAEPRLDLQR
LERLAPQRHQFHRQQDLAGQLAPLAVAIAEQQRQQSELHSRTSELEQALETARQALAQHQ
AQHSDNAPRLRQAFAAQGDLARLDKELGEQRAACQQAAQEVSDAEQHLQQLQESQLRSQQ
QLAQIDAALADSEHLGSLANAWQAYLPQLKQVMLIGGRLAKGREELPGLQAQVSQANAQL
QAQRDNFEMLFREAGAEPHALAEQIDLLGAMLQDNRKQQRAVEELARLHGRELELRQAID
ALRDRQQQAMQQRQQLIGAGTAAKSELESAEQALTLTRQLLDRQRLARNTSVEELRAQLR
DGEPCPVCGSAEHPFHQPEALLHSLGRHDQAEEEAAQKQVEHLNARLVELRTELGVVNAQ
LKDYQQQQLTLSKQLQPLLEQVQAHALWPALAPQDDKARSAWLDGQLRRLGDEIDRDEKR
QGALLALQKDAARLTQQLQTASEAQQQAQRHLDQQHQALAADQQQLEQGLNDLASVLPQD
ILQALRDDPAQAFLGLDQQIALRRQQLDQRKDEQEEQQARQQQLDKLRDQQQARQHNQQQ
LLQKIAALDEQRQQAQATLGELLGEQASAEAWQQHMESQLEQARAADADTAQRLQALRTQ
GVQLAAELNANSQRQQALEHEHQQLQGAIAQWRSSHPELDDAGLDRLLAIDDAQLGELRQ
QLQAAEKAIEQGRVLLQEREQRLQQHAAQAHGELPVEALEQSLAELQQQLVAQEQQCAEL
RAQQADDQRRQQAHQALAEQIDQAYQQWQRWARLSALIGSASGDVFRKIAQGYNLDLLLH
HANSQLRQLARRYRLKRGGSALGLLVLDTEMGDELRSVHSLSGGETFLVSLALALGLASM
ASSTLRIESLFIDEGFGSLDPESLQLAMDALDGLQAQGRKVAVISHVQEMHERIPVQIQV
RRQGNGLSDVEVSG
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcttgccatccgcctgaagaacctcgcctcgctggccgggccgatcgacatc
gatttcaccgcagagcccctggccagcgctggcctgttcgccatcaccgggcccaccggc
gccggcaagagcaccctgctcgatgccctgtgcctggccttgttcggcactgtgccgcgg
ctgaacgacattgcccgggaagccaaggtgcccgacgccgacggcgacatccccacctcg
gacccgcgcaatctgctgcgccgcggcaccggcagcggttttgccgaggtcgacttcgtc
ggcatcgacggcagccgctaccgcgcccgctgggaagccaaccgcgcccgcgagaaagcc
aatggcaagctgcagaacagccgccagagcctgtacgacctggacagcgaacagctgctt
ggcagtggcaagaatgagtacaagcaattgatcgaagcccgcctggggctgaacttcgaa
cagttcacccgcgcggtaatgctggcccagagcgagttcggcgccttcctcaaggccgac
gacaaagagcgcagcgagctgctggaaaagctcaccaacacggcaatctatacccgcctc
ggccaacgcgccttcagcaaggcgcgggaaaccggcgaacgccacaacgacctgaagaag
caggccgagcacctgctgccgatggcaagcgacgcccgcgccctgctcgaccagcaactg
gaccaggcccagcagcagttcaaggccgaccaggcccgccagcgccagctggaacagcag
cgcgtctggttcgacgaacaacgccagctgcaagcccagcacggcgaagcccatgcagcc
ttgcaagccgccgagcacaattggcagcaactggccgaaccgcgcctcgacctgcagcgc
ctggagcgccttgcaccgcagcgtcaccagttccatcgccagcaggatctggccgggcaa
ttggcgccgctggccgtggcgattgccgaacagcagcgccaacaaagcgaactgcatagc
cgcaccagcgaactcgagcaggcactggaaacggcgcgccaggccctggcccagcatcag
gcccagcacagcgataacgccccgcgtctgcgccaggcattcgccgcccaaggcgacctc
gcccgcctcgacaaagaactgggcgaacaacgcgcagcctgccagcaggctgcgcaggaa
gtcagcgacgctgagcaacacctgcagcagttgcaagaaagccagctgcgcagccagcag
caactggcgcagatcgatgcggcattggccgacagtgaacacctgggtagcctggccaac
gcctggcaggcctatctgccgcaattgaagcaagtgatgctgatcggcggccggctggcc
aagggccgcgaggagttgccaggcctgcaggcccaggtgagccaggccaatgcccagctg
caagcccagcgcgacaacttcgagatgctgttccgcgaagccggggccgaaccccatgcg
ctggccgagcagatcgacctgctcggcgccatgctccaggacaaccgcaagcagcagcgc
gctgtcgaggagcttgcccgcctgcatggccgtgagctggaactgcgccaggcgatcgac
gccctgcgcgatcgccagcagcaggccatgcagcagcgccagcaactgatcggcgcaggc
accgcggccaagagcgagctggaaagcgccgagcaggccctgacactgacccgccagttg
cttgatcgccagcgcctggcgcgcaacaccagcgtcgaagaactgcgcgcccaactgcgc
gatggcgagccgtgcccggtatgcggcagcgccgagcacccgttccatcagccagaagcc
ttgctgcacagcctgggccgccacgaccaggccgaggaggaggcagcgcagaaacaagtc
gaacacctcaacgccaggctggtggagctgcgtaccgaactgggcgtggtcaacgcccag
ctcaaggattatcagcagcaacagctcacgctgagcaaacagctacagccgttgctcgaa
caggttcaggcccatgccctgtggccggcgctcgcgccccaggacgacaaggctcgtagc
gcctggctcgacggccagttgcgccgcctgggcgacgagatcgaccgcgacgagaaacgc
cagggcgccctgctcgccttgcaaaaggacgccgctcgcctcacccagcagctacagact
gccagcgaggcccagcagcaggcccagcgccacctcgaccagcaacaccaagccctggcg
gccgaccagcagcaactggaacagggcctgaacgacctggccagcgtgctgccccaggac
attctccaggcgctgcgcgacgacccggcccaggccttcctcggtcttgaccagcagatt
gccctgcgccgccagcaactcgaccagcgcaaggacgaacaggaagaacaacaggcccgc
cagcagcagctggacaagctgcgcgaccagcaacaggcccggcagcacaatcagcagcaa
ctgctgcagaaaatcgccgcactggacgaacagcgccagcaggcccaggccaccctcggc
gagctgctcggcgagcaggccagcgccgaagcctggcagcagcatatggagtcacagctg
gaacaggctcgcgctgccgacgccgacactgcccagcgcttgcaggcattgcgtacccag
ggcgtgcaactggccgctgaactcaacgccaacagccagcgccagcaggccctggagcac
gagcaccagcagctgcagggcgcaatcgcccaatggcgcagcagccacccggaactggac
gacgccggcctcgaccgcctgctggccatcgacgacgcccagctcggtgagctgcgccaa
cagttgcaggcggcggagaaggccatcgagcaaggccgggtactgttgcaggagcgcgag
cagcgcctgcagcaacatgctgcccaagcccatggagaactgccggtcgaagcgctggag
cagagcctcgccgagctgcaacagcagttggtcgcccaggagcagcaatgcgccgaactg
cgcgcccagcaggctgacgatcaacgccgccagcaggcacaccaggccctggccgaacag
atcgaccaggcctatcagcagtggcaacgctgggcacgcctgagcgccctgatcggttcc
gcctcgggcgatgtgttccgcaagatcgcccagggctacaacctcgacctgttgctgcac
cacgccaacagccagctacgccaactggcccggcgctatcgcctcaagcgcggcggcagt
gccttgggcctgctggtgctggacaccgagatgggcgacgaactgcgttcggtgcattcg
ctgtcgggcggcgaaaccttcctggtctcgctggcactggcactgggcctggcctcgatg
gcttccagcaccttgcgcatcgaatcgctgttcatcgacgagggcttcggcagcctcgac
cccgagtcgctgcaactggccatggacgctctcgacggcttgcaggcccagggccgcaaa
gtggcggtgatctcccacgtacaggagatgcacgagcgcatcccggtgcagatccaggtg
cgccggcaaggtaacggtctgagcgatgtcgaggtgagcgggtga
DBGET
integrated database retrieval system
