Entry |
|
Symbol |
fadB
|
Name |
(GenBank) fatty acid oxidation complex subunit alpha FadB
|
KO |
|
Organism |
pory Pseudomonas oryziphila
|
Pathway |
pory00280 | Valine, leucine and isoleucine degradation |
pory00907 | Pinene, camphor and geraniol degradation |
pory01110 | Biosynthesis of secondary metabolites |
pory01120 | Microbial metabolism in diverse environments |
|
Module |
pory_M00957 | Lysine degradation, bacteria, L-lysine => glutarate => succinate/acetyl-CoA |
|
Brite |
KEGG Orthology (KO) [BR:pory00001]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EJA05_09080 (fadB)
00650 Butanoate metabolism
EJA05_09080 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EJA05_09080 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EJA05_09080 (fadB)
00310 Lysine degradation
EJA05_09080 (fadB)
00380 Tryptophan metabolism
EJA05_09080 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EJA05_09080 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EJA05_09080 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EJA05_09080 (fadB)
00930 Caprolactam degradation
EJA05_09080 (fadB)
Enzymes [BR:pory01000]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EJA05_09080 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EJA05_09080 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EJA05_09080 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EJA05_09080 (fadB)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
1914305..1916452
|
AA seq |
715 aa
MIYEGKAITVKALESGIVELKFDLKGESVNKFNRLTLNELREAVDAIKADASVKGVIVSS
GKDVFIVGADITEFVDNFKLPEAELVAGNLEANRIFNAFEDLEVPTVAAINGIALGGGLE
MCLAADYRIMSSTAKIGLPEVKLGIYPGFGGTVRLPRLVGSDNAIEWIASGKENRAEDAL
KVGAVDAVVTPELLQAGALDLIKRAISGELDYKAKRQPKLEKLKLNAIEQMMAFETAKGF
VAGQAGPNYPAPVEAIKSIQKAANFGRDKALEVEAAGFAKLAKTSVAESLIGLFLNDQEL
KRKAKAHDEIAHDVKQAAVLGAGIMGGGIAYQSAVKGTPILMKDIREEAIQLGLNEASKL
LGKRVEKGRLTPAKMAEALNAIRPTLSYGDFANVDIVVEAVVENPKVKQAVLAEVEGQVK
EDAILASNTSTISINLLAKALKRPENFVGMHFFNPVHMMPLVEVIRGEKSSEVAVATTVA
YAKKMGKNPIVVNDCPGFLVNRVLFPYFGGFAKLVSAGVDFVRIDKVMEKFGWPMGPAYL
MDVVGIDTGHHGRDVMAEGFPDRMKDDRRSAVDALYEANRLGQKNGKGFYAYETDKRGKP
KKVFDADVLDVLKPVVFEQREVTDEDIINWMMVPLCLETVRCLEDGIVETAAEADMGLVY
GIGFPPFRGGALRYIDSIGVAEFVALADKYADLGPLYHPTAKLREMAKSGQRFFN |
NT seq |
2148 nt +upstreamnt +downstreamnt
atgatttacgaaggtaaagccatcacggttaaggctcttgaaagcggcatcgtcgaactg
aagttcgacctcaagggtgagtccgtcaacaagttcaaccgcctcactctgaacgagctg
cgcgaggccgtcgacgccatcaaggccgacgcttcggtcaagggcgtgatcgtcagcagt
ggcaaggacgtgttcatcgtcggcgccgacatcaccgagtttgtcgataatttcaagctg
cccgaggccgagctggttgccggcaacctggaagccaaccgtatcttcaacgccttcgaa
gacctcgaagtgccgacggttgccgccatcaacggcatcgccctgggcggtggcctggag
atgtgcctggccgccgattaccgaatcatgtccagcactgccaagatcggcctgccggaa
gtcaaactgggcatctacccaggctttggcggcaccgtgcgcctgccgcgcctggtcggc
tcggacaacgccatcgagtggatcgcttcgggcaaggaaaaccgtgccgaagacgccctg
aaagtcggcgccgtcgatgccgtggttacccctgagctgctgcaggcgggtgcactggac
ctgatcaagcgcgccatcagcggcgagctggactacaaggccaagcgccagcccaagctg
gagaagctcaagctcaacgccatcgaacagatgatggccttcgagactgccaagggcttc
gtcgcaggccaggccggcccgaactacccggcgccggtcgaagccatcaagagcatccag
aaagccgccaacttcggccgtgacaaggcgctggaagtcgaggccgcgggcttcgccaag
ctggccaagacctcggttgccgagagcctgatcggcctgttcctgaatgaccaggagctc
aagcgcaaggccaaggcccatgacgagatcgcccacgacgtgaagcaggccgccgtgctc
ggcgccggcatcatgggcggcggcatcgcctaccagtcggccgtcaagggcacgccgatc
ctgatgaaggacatccgtgaggaagccatccagctgggcctgaacgaggcgtccaagctg
ctcggcaagcgcgtcgagaaaggccgcctcaccccagcgaagatggccgaagcgctcaac
gccattcgcccgaccctgtcgtatggcgatttcgccaacgtcgatatcgtggtcgaggcc
gtggtcgagaacccgaaggtcaagcaagcggtcttggccgaggtggaagggcaggtgaaa
gaggacgccatcctggcctccaacacctcgaccatctcgatcaacctgctggccaaggcg
ctcaagcgcccagagaacttcgtcggcatgcacttcttcaacccggtgcacatgatgccg
ctggtcgaagtcatccgtggcgagaagtccagtgaagtggccgttgccaccaccgtggcc
tacgccaagaaaatgggcaagaacccgatcgtggtcaatgactgcccgggcttcctggtc
aaccgcgtgctgttcccgtacttcggcggcttcgccaagctggtcagcgccggtgtcgac
tttgtgcgcatcgacaaggtcatggaaaagttcggctggccgatgggcccggcctacctg
atggacgtggtcgggatcgacaccggccaccatggccgtgacgtaatggctgaaggcttc
ccggaccgcatgaaggacgatcgtcgctctgccgtcgatgcgctgtacgaggccaaccgc
ctgggccagaagaacggcaagggcttctacgcctacgagaccgacaagcgcggcaagccg
aagaaagtcttcgatgccgacgtgctcgacgtgctcaagccggtcgttttcgaacagcgt
gaggttaccgacgaagacatcatcaattggatgatggtcccgctgtgcctggagaccgtg
cgctgcctggaagacggcatcgtcgaaaccgccgccgaagccgatatgggcctggtctac
ggcatcggtttccctcctttccgcggtggcgcgctgcgctacatcgattcgatcggggtc
gccgagttcgtcgcactggccgacaagtacgccgacctggggccgctgtaccaccccacc
gcgaagctgcgcgaaatggccaagagcggccagcgcttcttcaactga |