Pseudomonas oryziphila: EJA05_11715
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Entry
EJA05_11715 CDS
T07791
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pory
Pseudomonas oryziphila
Pathway
pory00550
Peptidoglycan biosynthesis
pory01100
Metabolic pathways
pory01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EJA05_11715 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EJA05_11715 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pory01011
]
EJA05_11715 (mrdA)
Enzymes [BR:
pory01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EJA05_11715 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pory01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EJA05_11715 (mrdA)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AZL68350
UniProt:
A0A3Q8U198
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All DBs
Position
complement(2496776..2498665)
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AA seq
629 aa
AA seq
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MPQPIPLKDHETEKHLVNRRLLACALLVFSLVAVLVGRLYVLQVVQHDQQTAVSENNRVH
VLPIPPERGLIYDRNGVVLADNKPSFNLTMTRERAGDSAKVLDALAQVLNLGEDERHQFD
KDLRRGRKPFEPVTLMVGLSEEQIALIAVNQFRLPGLEVEPQFIREYPLAEHFAHSVGYV
GRINEKEAKSLDSTEYRGTQSIGKTGVERFYEHELHGQVGYEEVETNAQGRVMRVLRHHD
PVPGKSIVLSLDAHLQQAAEKALGDRRGAVVVLDPANGDVLAMVSNPSFDPNLFVKGISS
RQYSALRDSIDRPLFNRVLRGLYAPGSTVKPEVAIAGLDSGVITPGSRVFDPGYYELPNY
DHKYRNWNHSGDGWVDMYTAIMRSNDTYFYDLAHKLGIDRLHDYMAEFGLGQKVSLDMFE
EAPGLMPSQAWKRATRRQAWFPGETLILGIGQGYMQVTPLQLAQATSLLASKGAWHRPHL
AMTVGGQAPIDPNPMPDIVLHDKRAWDQVNQGMQMVMHDARGIARAAAAGAQYRIAGKSG
TAQVVAIKQGERYNRNKTLERHRDNALFVGFAPADHPAVVVAVMIENGEAGGRVAGPVVR
EVMDAYLLDEQGHLKGQYAGNGTPAIPHT
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgccacaacccatccccctcaaggaccacgaaacagaaaagcacctggtcaaccgccgg
ttgctggcctgtgccctgctggtgttcagcctggtggcggtgctggtgggccggctctat
gtgctgcaggtggtgcagcatgaccagcagaccgcagtgtcggaaaacaaccgcgtgcac
gtgctgccgatcccgcccgagcgcgggctgatctatgaccgcaatggcgtggtcctggcc
gacaacaagcccagcttcaacctgaccatgacccgcgagcgggccggtgattcggccaag
gtgctcgacgccctggcgcaggttctcaacctcggcgaggacgagcgccaccagttcgac
aaggacctgcgccgtggccgcaagcccttcgagccggtcacgctgatggttggcctgagc
gaggaacagattgccctgatcgccgtcaaccagttccgcctgccggggctggaggtggag
ccgcagttcatccgcgaatacccactggccgagcacttcgcccattcggtgggctatgtc
gggcgcatcaacgagaaagaagccaagtccctcgacagcaccgaataccggggcacccag
tcgatcggcaagaccggcgtcgagcgcttctacgaacatgaactgcacggccaggtgggt
tacgaagaggtcgagaccaacgcccagggccgggtgatgcgcgtgctgcgccaccacgac
ccggtgccgggcaagtccatcgtgctgagcctggacgcccacctgcagcaggccgcggaa
aaggccctgggtgaccgacgtggcgcagtggtggtgctggacccggccaacggcgacgtg
ctggcgatggtcagtaaccccagcttcgaccccaacctgttcgtcaagggcatcagctcc
aggcagtactcggcactgcgcgactcgatcgaccggccattgttcaaccgcgtgctgcgc
ggcctgtatgccccaggctcgacggtcaagccggaagtggccattgccggcctcgacagc
ggcgtgatcacccccggtagccgggtgttcgaccccggttactacgaactgcccaactac
gaccacaagtaccgcaactggaaccacagcggcgatggctgggtagacatgtacaccgcg
atcatgcgctccaacgacacctacttctacgacctggcgcacaagctgggcatagaccgg
ctgcatgactacatggccgaattcggcctgggccagaaggtctcgctggacatgttcgag
gaagcccccgggctgatgccgtcgcaagcctggaaacgcgccacccgccgccaggcctgg
ttccccggcgaaacgctgatccttggcatcggccagggctacatgcaggtcaccccgctg
caactggcccaggccaccagcctgctggccagcaagggcgcctggcaccgcccgcacctg
gcgatgaccgtcggcggccaggcccccatcgaccccaaccctatgccggacatcgtgctg
cacgacaagcgcgcctgggaccaagtcaaccagggcatgcaaatggtcatgcacgatgcc
cgcggcatcgcccgcgccgccgccgccggggcccagtaccgcatcgccggcaagagcggc
accgcgcaggtggtggcgatcaagcagggcgagcgctacaaccgtaacaagaccctggaa
cgccaccgcgacaatgccctgttcgtcggcttcgccccggccgaccacccggccgtggtg
gtggcagtgatgatcgagaacggcgaggccggtggacgggtggcggggccggtggtgcgc
gaggtgatggatgcctatctgctggatgagcaggggcatctgaaagggcaatatgccggc
aatggcacacctgccataccgcacacttag
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