Pseudomonas oryziphila: EJA05_15170
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Entry
EJA05_15170 CDS
T07791
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
pory
Pseudomonas oryziphila
Pathway
pory03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
EJA05_15170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pory03400
]
EJA05_15170
DNA repair and recombination proteins [BR:
pory03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
EJA05_15170
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Tom5
Motif
Other DBs
NCBI-ProteinID:
AZL68990
UniProt:
A0A3S8UKV9
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All DBs
Position
complement(3261851..3262687)
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AA seq
278 aa
AA seq
DB search
MARAIWKGAISFGLVHIPVSLNTAVRSERVDFDWLDKRSMEPVGYKRVNKITGKDIDKDN
IVKGVEYEKGRYVVISEEEIRKARPEATQTIDIFSFVDASDIPLQQFDTPYYLSPDRRGG
KVYALLRETLHSTGKVALATVVLHTRQHLALLRPLEDALVLITLRWPEEVRGLQTLELDN
SVTQSKVDKRELDMARRLVEDMSGAWTPDEYHDAFRQTILDLVEEKASKGKIATVDKGEG
TTAEKGADIIDLTELLKRSLGGKTKAKKPAAKRPRKAS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atggcccgggcaatttggaaaggcgcgatcagctttggcctcgtgcacatccccgtctcg
ctcaacaccgccgtgcgcagcgagcgtgtggatttcgactggctggacaagcgcagcatg
gagccggtcggctacaagcgggtgaacaagatcaccggcaaggacatcgacaaagacaac
atcgtcaagggcgtggagtacgaaaagggccgctacgtggtgatcagcgaggaggaaatt
cgcaaggccaggcccgaggcgacccagaccatcgatatcttttcgttcgtcgacgccagc
gacatcccgctgcagcagttcgacacgccttactacctgagccccgaccgccgtggcggc
aaggtctatgccttgctgcgcgagaccctgcacagcaccggcaaggtggccctggccacc
gtggtgctgcacacccgccagcacctggcgctgctgcgcccgctggaagatgcactggtg
ttgatcaccctgcgctggcccgaggaggtgcgtgggctccagacgctggagctggacaac
agcgtgacccaaagcaaggtcgacaagcgtgagctggacatggcccggcgcctggtggaa
gacatgagcggagcctggacgcctgacgaataccatgatgcgtttcgccagaccatcctc
gacctggtggaggagaaggccagcaagggcaagatcgcgaccgtggacaaaggcgagggc
acgacggccgagaagggggcggacatcatcgacctcaccgagctgctcaagcgcagcctc
ggcggcaagaccaaggcgaagaaaccggcggccaagcgaccgcgcaaagcgtcatag
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