Pseudomonas oryziphila: EJA05_19380
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Entry
EJA05_19380 CDS
T07791
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pory
Pseudomonas oryziphila
Pathway
pory00020
Citrate cycle (TCA cycle)
pory00640
Propanoate metabolism
pory00660
C5-Branched dibasic acid metabolism
pory00720
Other carbon fixation pathways
pory01100
Metabolic pathways
pory01110
Biosynthesis of secondary metabolites
pory01120
Microbial metabolism in diverse environments
pory01200
Carbon metabolism
Module
pory_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pory_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
EJA05_19380 (sucD)
00640 Propanoate metabolism
EJA05_19380 (sucD)
00660 C5-Branched dibasic acid metabolism
EJA05_19380 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
EJA05_19380 (sucD)
Enzymes [BR:
pory01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
EJA05_19380 (sucD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
AZL69749
UniProt:
A0A3S8UMZ2
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All DBs
Position
complement(4123882..4124766)
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AA seq
294 aa
AA seq
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MSVLINKDTKVICQGFTGSQGTFHSEQAIAYGTKMVGGVTPGKGGTTHLGLPVFNTVKEA
VQATGADASVIYVPAPFCKDSILEAAFGGIKLIVCITEGIPTLDMLDAKVKCDELGVTLI
GPNCPGVITPGECKIGIMPGHIHLPGKVGIVSRSGTLTYEAVKQTTDAGFGQSTCVGIGG
DPIPGSNFIDILKLFQEDPKTEAIVMIGEIGGSAEEEAAAYIKAHVTKPVVSYIAGVTAP
AGKRMGHAGAIISGGKGTADEKFAALQDAGVKTVRSLADIGKALAELTGWEAKK
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcctgatcaataaagacaccaaagtcatctgccagggcttcaccggctcgcag
ggtactttccactccgaacaggccatcgcctacggcaccaagatggtcggcggcgtaacc
ccaggcaagggtggcaccacccacctgggcctgccggtgttcaacaccgtcaaggaagcc
gtacaagctaccggcgctgacgcttcggtgatctacgttccggctccgttctgcaaagac
tcgatcctggaagctgccttcggcggcatcaagctgatcgtctgcatcaccgagggtatc
cctaccctcgacatgctggacgccaaggtcaagtgcgacgagctgggcgttaccctgatc
ggccctaactgcccaggtgtcatcactccgggcgagtgcaagatcggcatcatgccaggc
cacatccacctgccaggcaaggtcggtatcgtgtcgcgttccggcaccctgacctacgaa
gctgtcaagcagaccaccgacgccggtttcggccagtcgacctgcgtcggcatcggcggt
gacccgatcccaggctccaacttcatcgacatcctgaagctgttccaggaagacccgaag
accgaagcgatcgtcatgatcggtgagatcggcggttcggctgaagaagaagccgcggcc
tacatcaaggctcacgtgaccaagccagtggtttcctacatcgctggtgtgaccgctcct
gcgggcaagcgtatgggtcacgctggcgccatcatttccggcggcaagggcactgcggac
gagaaattcgccgcgctgcaggacgctggtgtgaagaccgtgcgttccctggctgacatc
ggcaaggccctggccgagctgactggctgggaagccaagaagtaa
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