Pseudomonas oryziphila: EJA05_20090
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Entry
EJA05_20090 CDS
T07791
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
pory
Pseudomonas oryziphila
Pathway
pory02020
Two-component system
pory02025
Biofilm formation - Pseudomonas aeruginosa
pory02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EJA05_20090
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
EJA05_20090
09142 Cell motility
02040 Flagellar assembly
EJA05_20090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pory03000
]
EJA05_20090
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pory02035
]
EJA05_20090
Transcription factors [BR:
pory03000
]
Prokaryotic type
Helix-turn-helix
Other families
EJA05_20090
Bacterial motility proteins [BR:
pory02035
]
Flagellar system
Flagellar assembly proteins
Others
EJA05_20090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
AAA_5
AAA_16
HTH_50
AAA_22
AAA_7
nSTAND3
bpMoxR
AAA
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AZL69880
UniProt:
A0A3Q8U2X0
LinkDB
All DBs
Position
complement(4301223..4302698)
Genome browser
AA seq
491 aa
AA seq
DB search
MWRETKILLIDDDSARRRDLAVVLNFLGEENLPCSSDDWQQTVESLASSREVLCVLIGAV
KAPASVLGLLKTVAAWDEFLPVLLLGDISSAEFPEELRRRVLSNLEMPPSYSQVLDSLHR
AQVYREMYDQARERGRQREPNLFRSLVGTSRAIQHVRQMMQQVADTDASVLILGESGTGK
EVVARNLHYHSKRREAPFVPVNCGAIPAELLESELFGHEKGAFTGAITSRAGRFELANGG
TLFLDEIGDMPLPMQVKLLRVLQERTFERVGSNKTQSIDVRIIAATHKNLENMIEDGTFR
EDLYYRLNVFPIEMAPLRERVEDIPLLMNELISRMEHEKRGSIRFNSASIMSLCRHGWPG
NVRELANLVERMAIMHPYGVIGVSELPKKFRYVDDEDEQLVDSLRSDLEERVAINGHTPN
FANHAMLPPEGLDLKDYLGSLEQGLIQQALDDANGIVARAAERLRIRRTTLVEKMRKYGM
SRQGGEDQAED
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtgaaaccaagattctcctgatcgatgacgacagcgctcgccgccgcgatctg
gcggtggtcctgaactttctcggcgaagaaaacctcccgtgctccagtgatgactggcag
cagacggtcgagtctcttgcctccagccgcgaagtgctgtgcgtgctgatcggggcagtg
aaggcgccggccagtgtgctggggctccttaagacagtggcggcgtgggatgagttcctt
ccggtgctgttgctgggcgatatttcttctgccgagttccccgaggagctgcgccgtcgc
gtgctgtccaacctcgagatgccgccgagctacagccaggtgctcgattcgctgcaccgc
gcccaggtgtaccgcgagatgtacgaccaggcccgcgagcgcggccggcagcgcgagccc
aacctgttccgcagcctggtaggcaccagccgtgccatccagcatgtgcggcagatgatg
cagcaggtggccgacaccgacgccagcgtgctcatcctcggcgagtccggcaccggcaag
gaggtggtggcgcgcaacctgcactaccactccaagcgccgtgaagcacccttcgtgccg
gtcaactgcggggcgattccggcagagctgctcgaaagcgaactgttcggccacgaaaag
ggcgccttcaccggggccatcaccagccgtgccgggcgtttcgaactggccaacggcggt
acgctgttcctcgacgaaatcggcgacatgccgctgcccatgcaggtcaagctgttgcgg
gtattgcaggagcgcacgttcgagcgcgtgggcagcaacaagacgcaaagcatcgatgtg
cgcatcattgccgccacccacaagaatctcgagaacatgatcgaggacgggaccttccgc
gaggacctgtactaccgactcaacgtgttcccgatcgagatggccccgctgcgtgagcgc
gtcgaagacatcccgctgctgatgaacgagctgatctcgcgcatggagcacgagaagcgc
ggttcgatccgtttcaactccgcctcgatcatgtcgctgtgccgacatggctggccgggc
aacgtgcgcgagctggccaacctggtggagcgcatggcgatcatgcatccatatggggtg
atcggcgtgtcggagctgcccaagaagttccgctatgtcgacgacgaagacgagcagttg
gtggacagcctgcgcagcgacctcgaagagcgcgtggccatcaacggccatacgccgaac
ttcgccaaccacgccatgctgccgccagaagggctggacctcaaggactaccttggcagc
ctggagcagggtctgatccagcaggcgctggacgatgccaacggtatcgttgcgcgtgcg
gctgaacgtttgcgtattcgtcgtaccaccctggtcgagaaaatgcgcaagtacggcatg
agccgccagggcggcgaggaccaggcggaggattga
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