Pseudomonas oryziphila: EJA05_20585
Help
Entry
EJA05_20585 CDS
T07791
Name
(GenBank) retention module-containing protein
Organism
pory
Pseudomonas oryziphila
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_4
Big_9
HemolysinCabind
Cadherin_5
VWA_2
CshA_repeat
Motif
Other DBs
NCBI-ProteinID:
AZL69971
UniProt:
A0A3S8UNY7
LinkDB
All DBs
Position
complement(4398637..4405752)
Genome browser
AA seq
2371 aa
AA seq
DB search
MARLVGVVSKVVGQVFAVGDDGHRRLLVEGDRLFAGEQLETGDASAVAVRLQNGAELTLG
RDSSLQMTPELLANHAPHVHTPDLQPSEAQLSDVERLQKAIAAGADPTEDAEPTAAGGNP
GGVAGALGGGHSFVMLSEVAGRVAPTIGFPTAGFNGIPELANRYLGERDIDGNDSGALNP
LAPPPPVNPPDHPVTLNGLEVQPGELTVNEANLPQGSADNPAALTQSGSFNVVAPDGVYN
LSVGGINVVTAGVVTGVGQSIVTGLGNILTITGYNPATGVVSYSYTLQSNESHPNGDGTN
SLMEHFPVSVTDSNGSHASGSLDVNIVDDVPKANADFAQITEGDSFSGNVLNNDVKGADV
RGDGQYVVGVRAGDDTSSSAHGHLGDPIYGQYGYLTLDAQGNATYHANPNQDLPPWATDT
FVYTIRDADGDESTTTISVKVLDSKLIAGTDSEVTVYEKALDLTKDGNDLAGGNVEGSDP
HSSGETASGSLANAVTGGVGALTFTLVGNAAGQYGQILLNADGSYTYTLTSAPNSPNHVN
DGPNVITESFTYQVKDSVGNTTTSTIVISIVDDVPKANADFAQITEGDSFSGNVLNNDVK
GADVRGDGQYVVGVRAGDDTSSSAHGHLGDPIYGQYGYLTLDAQGNATYHANPNQDLPPW
ATDTFVYTIRDADGDESTTTISVKVLDSKLIAGTDSEVTVYEKALDLTKDGNDLAGGNVV
GSDPHSSGETASGSLANAVTGGVGALTFTLVGNAAGQYGQILLNADGSYTYTLTSAPNSP
NHVNDGPNVITESFTYQVKDSVGNTTTSTIVVSIVDDVPKAQADFAHVSEGDSISGNVLA
NDVFGADVRGDGQYVVGVRAGNDTSTSASGHVGDPINGLYGYLTLDAQGNATYHANPNQD
LPPWATDTFVYTIRDADGDESTTTISVKVLDSKLIAGTDSEVTVYEKALDLTKDGNDLAG
GNVEGSDPHSSGETASGSLTDAVTGGVGALTFTLVGNAAGQYGQILLNADGSYTYTLTSA
PNSPNHVNDGPNVITDSFTYQVKDSVGNTTTSTIVISIVDDVPKAHCDFAHVSEGDSISG
NVLDNDVKGADVRGDGQYVVGVRAGDDTSSSAHGNLGDPIYGQYGYLTLDAQGNATYHAN
PNQDLPPWATDTFVYTIRDADGDESTTTISVKVLDSKLVAGTDSEVTVYEKALDLTKDGN
DLAGGNVEGSDPHSSGETASGSLTDAVTGGVGALTFTLVGNAAGQYGQILLNADGSYTYT
LTSAPNSPNHVNDGPNVITDSFTYQVKDSLGNTTTSTIVISIVDDVPKAHCDFAHVSEGD
SISGNVLANDVFGADVRGDGQYVVGVRAGNDTSTSASGHVGDPINGLYGYLTLDAQGNAT
YHANPNQDLPPWATDTFVYTIRDADGDESTTTISVKVLDSKLTASEDNDVTVYEKALDLH
KDGNDLAAGSVVGSDPGSTGETASGSLVGSVTGGSGALTYSLEGNPAGQYGQLLLKADGS
YTYTLTSAPKTPGGANDGANTVVEHFTYKATDAHGNSVTNTIAINIVDDVPKAECAVRSI
TPGQVDSNILLVIDVSGSMAWDSGVNGLSRLDLAKQAINTLLDKYDAMGDIKVQIVTFSS
GATQQAQTWVSIGEAKNLIAGLHADGATYYDSAATKAQQAFATSGKLDGAQNVSYFFSDG
EPSSGHGMTSTRETTWETFLDQNGVKSYAIGMGNGVNEGNLDPLAYDGSSHVDTQSVVVT
DLNQLGAVLSGMVQGAPITGSLMSGGDFGADGGFIKALMVDGTTYGFDPKANGGQGGYTV
SGGVDKASFDTLSNSLTIKTSLGGTLLVNMDNGEFTYTPPKDNGGQVEKFTFTASDNDGD
TSTATLTVNINGNHAPIAGADHIITNISGTSVSVPAEALLANDSDADHDRLSAAPITFNT
GFADKGAGFTPGVQAQTVYMDGTKDRAENQFRTLARSEFTSQSGSMTAALVVAGYLGLIS
NSNANDEDTFTVTLRKGETLTLDHDRPAGNLLMEWKDATGSYQPIADGKSFTASHDGVYS
IHLVNTENALGSSKAAENYKLSLLVDYSNASNPVVHDTYSVSDNHGGTATGNVDITYQAG
HVLEGTGGDDVLLAGAGDNTLNGGAGNDVLVAGAGNDSLYGGDGNDLLIAGPGNDLLDGG
QGIDTVSFAKAAAGVVVDLGNVGAQNTGGAGVDTLTSIENLIGSDYNDTLIGNGGDNVLN
GGAGNDVLKGGGGNDTLIGGPGDDTLTGGSGNDTFVWQKGDSGHDTVTDFTPGSDRLDLS
QLLQGENATSASLDDYLHFKVSGTGSNVVSTIEVSSVAGAAPTQTIELAGVDLAQHYGVT
AGAGGLIAAGHDTATIINGMLNDHSLKVDTV
NT seq
7116 nt
NT seq
+upstream
nt +downstream
nt
atggccagattagtcggcgtggtcagcaaggtggttggccaggttttcgcggttggggac
gacggccaccggcggttgctggtggaaggcgaccgcctgtttgccggtgagcagctcgaa
acgggggatgccagtgccgtggcagtgcgcctgcagaacggtgccgaactcacactgggc
cgcgacagcagcctgcagatgaccccggagttgctggccaatcacgcaccccatgtgcat
acccccgacctgcaaccgagcgaggcgcaactcagtgatgtcgagcgcttgcaaaaggcc
atcgctgcgggcgccgaccctaccgaggacgccgagcccactgcggcgggtggtaacccc
ggcggcgtggcaggcgcgttgggtggcgggcacagtttcgtcatgttgtccgaggtggca
gggcgcgtcgcccctaccatcggtttccccacggcaggtttcaacggtatccccgagctg
gccaaccgttacctgggcgagcgggacatcgacggcaacgacagtggggcattgaatccg
cttgcgccaccaccgccagtcaatccgccggatcacccggtcaccctcaatggcctggag
gtccagcccggtgagctgaccgtgaatgaagccaacctgccccagggcagcgcggacaac
ccggcggcactgacgcagagcggcagtttcaacgtggtggcgccggatggggtatacaac
ctcagtgtcggcggcatcaacgtggttaccgccggtgtggtgaccggtgtggggcagtcc
atcgtcaccggccttggcaatatcctcaccatcaccggctacaacccggccacgggcgtg
gtcagctacagctacacgctgcagagcaacgaaagccatcccaatggcgatggcaccaac
agcctgatggaacatttcccggtcagtgtcaccgacagcaacggcagccatgccagcggc
agccttgatgtgaacatcgtcgacgacgtgcccaaggccaatgccgacttcgcccaaatc
accgagggtgacagcttcagcggcaacgtgctgaacaacgacgtcaaaggcgccgatgta
cgcggcgacggccagtatgtggtgggggtacgagcaggcgacgatacgtcgagttccgcg
catggtcatttaggcgacccgatctacggccaatatggctacctgaccctggatgcccag
ggcaacgccacctaccacgccaaccccaaccaggacttgccgccgtgggcgacggacacc
ttcgtctacaccatccgtgatgccgatggtgacgagagcaccacgaccatctcggtcaaa
gtactggacagcaagctgatcgccggcactgatagtgaagtgacggtctacgagaaagcc
ctggacctgaccaaggacggcaatgacctggccggtggcaacgtagaggggagcgacccg
cattccagtggcgaaacagcatccggttcgctggccaatgcggtcaccggtggtgtcggt
gcgttgaccttcaccctggtcggcaatgcagctggccaatacggccagatcctgctgaac
gccgatggcagctacacctataccctgacctcggcgccgaactcgccaaaccacgtcaat
gatggcccgaacgtgatcactgaaagcttcacctatcaggtgaaggactcggtgggtaac
acgaccaccagtaccatcgtgatcagcatcgtcgacgacgtgcccaaggccaatgccgac
ttcgcccaaatcaccgagggtgacagcttcagcggcaacgtgctgaacaacgacgtcaaa
ggcgccgatgtacgcggcgacggccagtatgtggtgggggtacgagcaggcgacgatacg
tcgagttccgcgcatggtcatttaggcgacccgatctacggccaatatggctacctgacc
ctggatgcccagggcaacgccacctaccacgccaaccccaaccaggacctgccgccgtgg
gcgacggacaccttcgtctacaccatccgtgatgccgacggtgacgagagcaccacgacc
atttcggtgaaggtgctggacagcaagctgatcgccggcaccgacagtgaagtgacggtc
tacgagaaagccctggacctgaccaaggacggcaatgacctggccggtggcaacgtagtg
gggagcgatccgcattccagtggcgaaacagcatccggttcgctggccaatgcggtcacc
ggtggtgtgggtgcattgactttcaccctggtcggcaatgccgctggccaatacggccag
atcctgctgaacgccgatggtagctacacctataccctgacctcggcgcccaactcgccg
aaccacgtcaacgatggcccgaacgtgatcaccgaaagcttcacctatcaggtgaaggac
tcggtgggtaacacgaccaccagtaccatcgtggtcagcatcgtcgacgacgtgcccaag
gctcaggccgacttcgcccatgtcagcgagggcgacagcatcagcggcaacgtattggcc
aacgatgtgttcggcgccgatgtacgcggcgacggccagtacgtggtgggtgtacgcgcc
ggcaacgacacctccacctcggccagcggccatgtgggcgaccctatcaacgggctgtac
ggctacctgaccctggatgcccagggcaacgccacctaccacgccaaccccaaccaggat
ctgccgccatgggcgacggacaccttcgtctacaccatccgtgatgccgacggcgacgag
agcaccacgaccatctcggtcaaggtgctggacagcaaactgatcgccggcaccgacagt
gaagtgacggtctacgagaaagccctggacctgaccaaggacggcaatgacctggccggt
ggcaacgtagaggggagcgacccgcattccagtggcgaaacagcatccggttcgctgacc
gatgcggtcaccggtggtgtgggcgcattgaccttcaccttggtcggcaatgctgctggc
caatacggccagatcctgctgaacgccgatggtagctacacctataccctgacctcggcg
cccaactcgccgaaccatgtcaacgacggtcctaacgtgatcaccgacagcttcacctat
caggtgaaggactcggtgggtaacacgaccaccagtaccatcgtgatcagcatcgtcgac
gacgtgcccaaggcccattgcgatttcgcccatgtcagcgagggcgacagcatcagcggc
aacgtgctggacaatgacgtcaaaggcgccgatgtacgcggcgacggccagtatgtggtc
ggagtgcgtgcaggcgacgatacgtcgagttccgcgcacggtaatttaggcgacccgatc
tacggccaatatggctacctgaccctggatgcccagggcaatgccacttaccacgccaat
cccaaccaggacctgccgccatgggcgacggacaccttcgtctacaccatccgtgatgcc
gacggtgacgagagcaccacgaccatctcggtcaaggtgctggacagcaaactggtcgcc
ggcaccgacagtgaagtgacggtctacgagaaagccctggacctgaccaaggacggcaat
gacctggccggtggcaacgtagaggggagcgacccgcattccagtggcgaaacagcatcc
ggttcgctgaccgatgcggtcaccggtggtgtgggcgcattgaccttcaccttggtcggc
aatgctgctggccaatacggccagatcctgttgaacgccgatggtagctacacctacacc
ctgacctcggcgcctaactcgccgaaccatgtcaacgacggtcctaacgtgatcaccgac
agcttcacttaccaggtgaaggattcgctgggcaacaccaccaccagcaccattgtgatc
agcatcgtcgacgacgtgcccaaggcccattgcgatttcgcccatgtcagcgagggcgac
agcatcagcggcaacgtattggccaacgatgtgttcggcgccgatgtacgcggcgacggc
cagtacgtggtgggtgtacgcgccggcaatgacacctccacctcggccagcggccatgtg
ggcgaccctatcaacgggctgtacggctacctgaccctggatgcccagggcaacgccacc
taccacgccaaccccaaccaggatctgccgccttgggcgacggacaccttcgtctacacc
atccgtgatgccgacggtgacgagagcaccacgaccatctcggtcaaggtgctggacagc
aaactgacggcgtccgaggacaacgacgtcactgtgtatgaaaaagccctggacctgcat
aaggatggcaatgacctcgcggccggcagcgtcgtgggcagcgacccagggtcgaccggc
gagacggcgtccggcagcctggtcgggtcggtcaccggcggctccggtgccttgacctac
agcctggagggcaatccggcagggcagtacgggcagttactgctcaaggctgacggttcc
tacacctacaccctgacctctgcaccgaaaaccccgggcggtgccaacgatggtgccaac
acggtggtggagcacttcacttacaaggccaccgacgcccatggcaacagtgtcaccaac
accattgccatcaacatcgtcgacgacgtgcccaaggccgagtgcgcagtgcgcagcatc
acccccggccaggtggactccaatatcctgctggtgatcgatgtctccggcagcatggcc
tgggactccggcgtgaatggcctgagccggctggacctggccaagcaagcgatcaacacg
ctattggacaagtacgacgcgatgggcgacatcaaggtgcagattgtcaccttctccagc
ggcgccacccagcaagcgcagacgtgggtatcgatcggcgaggccaagaacctgatcgcc
gggctccacgccgacggcgcgacctactacgactcggcagccaccaaggcccagcaggcg
ttcgccaccagcggcaagctcgatggtgcacagaatgtcagttacttcttctccgacggt
gagccgagctcgggccacggcatgacctccacccgtgaaaccacgtgggagacgttcctc
gaccagaatggcgtcaagtcttacgccatcggtatgggcaatggcgtcaacgagggcaat
ctcgacccgctggcctacgatggcagcagccatgtcgatacccagtcggtggtggttacc
gacctcaaccagctcggcgcggtgctctcgggcatggtgcagggcgcaccgatcaccggc
agcctgatgagtggcggcgacttcggtgccgatggtggcttcatcaaagccctgatggtg
gacggcaccacctatggcttcgacccgaaagccaacggcgggcagggcggttacacggtc
agtggcggggtggacaaggcgtcgttcgatactctcagcaacagcctcaccatcaagacc
agcctgggcggcaccctgctggtgaacatggacaacggtgaattcacctacacaccaccc
aaggacaacggcggccaggtggagaaattcaccttcacggccagcgacaacgacggtgat
accagcactgccaccctgacggtgaacatcaacggcaaccatgcaccgatcgccggtgca
gaccacatcatcaccaatatcagcggtaccagcgtcagcgtgccggccgaagcgctgctg
gccaacgacagcgatgcggaccacgatcggctgagcgcggcgccgatcaccttcaacacc
ggcttcgccgacaaaggcgcaggcttcaccccgggcgtccaggcgcagaccgtctacatg
gacggcaccaaggaccgtgccgaaaaccagttccgcactctggcacgcagcgagttcacc
agccagtcgggcagcatgaccgcggcactggtggtggcgggctacctcgggctgatcagc
aacagcaacgccaacgacgaggacaccttcaccgtcaccctgcgcaagggcgaaaccctc
accctcgatcacgaccgcccggccggcaacctgttgatggagtggaaggacgccactggc
agctaccagccgattgccgatggcaagagtttcacggccagccatgacggggtgtacagc
attcacctggtcaacaccgagaacgccctgggtagcagcaaggctgccgagaactacaag
ctgagcctgctggtggactacagcaacgccagtaaccccgtggtccatgacacctacagc
gtcagcgacaaccatggcggcacggcgaccggcaacgtcgatatcacttatcaggcaggt
catgttctcgagggcacgggaggggacgatgtgctgctcgccggggctggcgacaatacg
cttaacggcggggccggcaatgacgtgctggtggccggggccggcaatgacagcctgtat
ggcggcgacggcaatgacttactgatcgcagggcccggcaatgacttgctcgacggcggg
cagggcatcgacacggtcagctttgccaaggccgctgccggggtggtggtcgatctgggc
aacgtcggtgcgcagaacaccgggggcgccggcgtggataccctgaccagcatcgagaac
ctgatcggctcagattacaacgataccttgatcggcaatggcggcgacaacgtgctcaac
ggtggcgctggcaatgatgtgctcaagggcggtggcggcaacgacacgctcattggcggc
ccgggtgatgacaccctgaccggcggcagtggcaacgacaccttcgtctggcagaagggc
gatagcgggcatgacaccgtgaccgatttcaccccgggctccgatcgcctcgatctgtcc
cagttgctgcagggcgagaacgccaccagcgcctcgctggatgactacctgcacttcaag
gtcagcggcacgggcagcaacgtggtgtcgaccatcgaggtgagcagcgtcgcgggggcg
gcgccgacccagaccatcgagctggccggggtcgacctggcccagcattacggggtcacg
gcaggtgccggtgggctgatcgcggccggtcatgatacggcgaccatcatcaacggcatg
ctcaatgaccattcgttgaaggtggatacggtgtag
DBGET
integrated database retrieval system
