Pseudomonas oryziphila: EJA05_20825
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Entry
EJA05_20825 CDS
T07791
Name
(GenBank) type IV secretion protein Rhs
Organism
pory
Pseudomonas oryziphila
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
Ntox47
DUF6531
RHS
TEN_YD-shell
OCRE
Motif
Other DBs
NCBI-ProteinID:
AZL70015
UniProt:
A0A3Q8U2J2
LinkDB
All DBs
Position
complement(4457192..4461958)
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AA seq
1588 aa
AA seq
DB search
MSLIIYAKFLLDNLDAHKPDGPARIAAFRQHSLATFEALQDSFLLGWALDLEQELRFTDS
VGNEVMRQAKGLGERRITGYANCPANGVLNIVHRFESLAFVPIGGTPYQLVEQVAAGQTP
QRFEGVLDANGQATISGCHANRRYRLYFHPKVSPAEVQALYASYDSLLDQLKGWLDGEWA
ERIAPHWDRMPPVGSMQRVNDIHKAMAKGVGSVLMNLFDDLKALVKLLFNLDGARDQLLQ
FISEADFDKLKAQAGSLLHTAFLMLDDELLMFYYATAILQWLALSPPEWQAQAYAMLNAG
LLLDVLLGIVLSGGLGLAFRLTAKGLKYASNTARGADGLLDGLQRLIDLSRQHALATHTK
RAQPLLTGGSVEVNSAAKVPLAIKSAAQDLDLVVDDAVSVVRGKRHSTLRVEQELDLPDA
PSQPRTPSDKPAQRADETATHRCPVSMVTGEELLTLKDAELFGVLPVEWVRLYRTSAAEI
DHGLGPGWSHSLCHRLQADGQGVLWCDHENRRTHFPMPDSQRPVIGNSLCSAAIYLGQTD
GELVIAEAGARPRYLHFIDGRLMALSDAYGNRVSLAYDHSGRLQHIDNGAGNRLLLSYQQ
GRLVTVEQQFWQSMYDSKGREQAPWVRVATLATYHYNDAGQLTEAGNGLDERERYRYDAA
NVILERQLAGGAAFYWEWEGEGRHARCVRHWSSVPGLEARYQWDGQGGVTVHNADGSQQF
YQHDDKARLVRQVDADGAEHHKTYDAKGRLIGERNPLGAETFYSYDDAGYLLSVRPEDSE
ATHYHYRDGHVCEVRRGQARWLYQRNAQGDVLSQTDPCGQVTGYRYDEQGRLVAIRQADG
GLHELGWNASGQLVSEALPGGGSRRYRYDALGRLVMRLRENASATQYTWDLAGRLSEVSL
PGGGVRRYQYNAYGRVTAQSDEQGRVTRFEYEGGLHLPSRRINPDGSCLHYRYDNGQLQL
SQVINERDECYRLAYHANGLLAEETGFDGRVTRYGYDLNGQLLEKTELGDDGEPWLTRYT
RDKQGRLLVKTLPDGQQVSHQYDALGRLVRVDDGHWPLAYEYDLCDRLVTEHQGWATLHY
GYDVMGQVSHCRLPDGSRLDYRYQPGGHLQTIDLDGQRLTAHRHGLGQELAREQGELLSQ
FQHDGQGRLVSQRVDRKEGPVFMRRYHYDDSGNLARLEDTRRGTRSYHYDPLDRLTSVRG
ELAEYFVHDPAGNLLAQSGLRGDPRDVQVQANRLLMHGDCHYSYDRFGNQASERRGHGQQ
LVTNYQYDSQHRLASVQLPDGRQARYRYDAFGRRVSKDVDGTETAFIWQGERLLAEHCQG
RWRSYVYEPGSFRPMVMLLRDGDTPVEALHYHLDHLGTPQEMTAVNGRIRWSARYRAYGH
VLRLDVDQVDNPLRFQGQYYDEETGLHYNRHRYYNPQTGRYLTPDPIGLAGGVNGYLYGV
NPTGWVDPLGLEACCPNGDWKFDPEKDLDYRSLPGNPFEQVRMALDEAFRRTGVPKSEFE
VVKWGKDRYGKSHPTEWKVKEGVNTGAEVNIDDPELVGSTKGPKVPHVGYQTEGKRERGG
RVRGHILLQEVPVSREGLRDKKRSGNRK
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgatcatctacgccaagttcctcctcgacaatctcgacgcccacaagcccgat
ggcccggcacgcatcgccgccttccgccagcacagcctcgccaccttcgaagcgctgcag
gacagcttcttgctgggctgggcgctggacctggagcaagagctgcgcttcaccgacagt
gttggcaacgaggtgatgcgccaggccaagggccttggcgaacggcgcatcaccggctac
gccaactgcccggccaatggcgtgctgaatatcgtgcaccgcttcgaaagcctggccttc
gtgcccatcggcggcaccccctaccaactggtcgagcaggtggcggcgggccagaccccg
caacgcttcgaaggggtgctcgatgccaacggccaggcaaccatcagcggttgccacgcc
aaccgccgctatcgcctgtacttccaccccaaggtcagcccggccgaggtccaggccctg
tacgcctcgtacgacagcctgctcgaccagctcaagggctggctggacggcgagtgggcc
gaacgtatcgccccacattgggaccgcatgccgccggtggggtcgatgcagcgcgtgaac
gacatccacaaggcaatggccaagggtgtcggcagcgtgctgatgaacctgttcgacgac
ctcaaggccctggtcaagctgctgttcaacctcgacggcgcgcgcgaccaactgttgcag
ttcatcagcgaggccgacttcgacaagctcaaggcccaggccggcagcctgctgcacacc
gccttcctgatgctcgacgacgagctgctgatgttctactacgccaccgcgatcctgcag
tggctggccctgagcccgcccgagtggcaagcccaggcttacgccatgctcaatgccggg
ctgttgctggatgtgctgttggggatcgtgctgtccggcggcctggggctggcgttccgc
ctcaccgccaagggcctcaagtacgccagcaataccgcccggggggccgacggcttgctg
gacggcctgcaacggctgatcgacctcagccgccagcatgccctggcgacccataccaaa
cgcgcccagccgctcttgaccggcggcagtgtcgaggtcaacagcgcggccaaggtaccg
ctggcaatcaagagcgccgcgcaggacctcgacctggtcgtggacgatgccgtgtcggtg
gtgcgcggcaagcgccacagcacgctgcgggtggagcaggagctcgacctgcccgatgcc
cccagccagccgcgcacccccagcgacaaacccgcccagcgcgccgacgagaccgccacc
caccgctgcccggtgtcgatggtcaccggcgaggaactgcttaccctcaaggatgccgag
ctgttcggcgtgctgccggtagagtgggtgcgcctgtaccgcaccagtgcggctgaaatc
gaccacggcctgggccccggctggagccacagcctgtgccaccgtttgcaggccgacggc
cagggcgtgctgtggtgcgaccacgaaaaccgccgcacccacttcccgatgccggacagc
cagcgcccggtgatcggcaacagcctgtgcagcgcggccatctacctgggccagaccgac
ggcgagctggtgatcgccgaggccggcgcgcgcccacgctacctgcacttcatcgacggc
cggctgatggccctgagcgacgcctacggcaaccgcgtaagcctggcgtacgatcacagc
ggccgcttgcagcacatcgacaacggcgccggcaaccgcctgctgctgagctaccagcaa
ggccgcctggtgacggtggagcagcagttctggcagtcgatgtacgacagcaaggggcgc
gagcaggcgccctgggtgcgggtggcgaccctggccacctaccactacaacgacgccggg
caactgaccgaagccggcaatggcctggacgagcgcgagcgctaccgctatgacgccgcc
aacgtcatcctcgagcgccagctggcggggggcgcggcgttttactgggagtgggaaggc
gagggccggcacgcccgctgcgtgcgccactggtccagcgtgccgggcctggaggctcgc
taccagtgggacggccagggcggcgtgacggtgcacaacgccgatggcagccagcagttc
tatcagcacgacgacaaggcccggctggtgcgccaggtagacgccgacggcgccgagcac
cacaagacctatgacgccaagggccggctgatcggcgagcgtaacccgctgggtgccgaa
accttctacagctacgacgacgccggctacttgctgtcggtgcgccccgaggacagcgag
gctacccactaccactatcgcgacggccatgtgtgcgaggtgcgccgtggccaggcgcgc
tggttgtaccagcgcaacgcccagggcgatgtgctcagccagaccgacccctgcgggcag
gtcaccggctaccgctatgacgaacagggccgcctggtcgccatccgccaggccgacggc
ggcctgcacgagctgggctggaacgcctctgggcaactggtcagcgaagccctgcccggc
ggcggttcgcggcgctaccgctacgacgccctcggccgcctggtgatgcgcctgcgcgag
aatgcctcggccacccagtacacctgggacctggccgggcgcctgagcgaagtgtcgctg
cctggcggcggtgtgcgccgctatcagtacaacgcctatggccgggtgaccgcgcaaagc
gacgagcagggccgggtgacccgcttcgaatacgaaggcggcctgcacctgccgtcgcgg
cgcatcaaccccgatggcagctgcctgcactaccgctacgacaacggccagctgcaactg
tcgcaagtcatcaacgagcgcgacgaatgctaccgcctggcctaccacgccaacggcctg
ctcgccgaagaaaccggtttcgacggacgcgtcacccgctacggctacgacctcaatggc
cagctactggaaaagaccgagctgggcgacgacggcgagccctggttgacccgctacacc
cgcgacaagcaaggccggctactggtcaagaccctgcccgacggccagcaggtcagccac
cagtacgacgccctgggccgcctggtgcgggtggacgacggccactggccgctggcctac
gagtacgacctgtgcgaccgcctggttaccgagcaccagggctgggcgaccctgcactac
ggctacgacgtgatgggccaggtcagccattgccgcttgcccgacggcagccgcctcgac
taccgctaccagcccggtggccacctgcaaaccatcgacctcgacggccagcgcctcacc
gcccaccgccatggcctcggccaggaactggcccgtgagcagggcgagctgctcagccag
ttccagcatgacggccagggccgcctggtaagccaacgggtcgatcgcaaggaaggcccg
gtgttcatgcgccgctaccactacgacgacagcggcaacctggcacgcctggaggacacc
cgccgcggcacccgcagctaccactacgacccgctcgaccgcttgaccagcgtgcgcggc
gaactggccgagtacttcgtccatgaccccgccggcaacctcctggcccagagcggcctg
cgcggcgacccccgcgacgtgcaggtgcaggccaaccgcctgctgatgcacggcgactgc
cactacagctacgaccgcttcggcaaccaggccagcgaacgccgcggccacggccagcag
ttggtcaccaattaccagtacgacagccagcaccgcctcgccagcgtccagctgcccgac
ggccgccaggcccgctaccgctacgatgccttcggccggcgcgtgtccaaggacgtcgac
ggcaccgagaccgccttcatctggcaaggcgagcgcctgctggccgagcactgccagggc
cgctggcgcagctacgtgtacgaacccggcagcttccgcccgatggtgatgctgctacgc
gacggcgacacccccgtcgaggccctgcactaccacctcgaccacctcggcactccccag
gagatgaccgccgtcaatggccgcatccgctggtcggcgcgctaccgcgcctacggccac
gtgctgcggctggacgtggaccaggtcgacaaccccctgcgcttccaggggcagtactac
gatgaagaaaccgggctgcattacaaccggcaccgttattacaacccacagacagggcgg
tacctgacgccggatccgattggactggcgggtggggttaatgggtatttgtatggtgtg
aacccgacggggtgggtggatccgttggggttggaggcgtgttgtccgaacggtgattgg
aagttcgatccagaaaaagatttggactatcgatccctgccgggcaacccttttgagcaa
gttagaatggcactggatgaagcattcaggcgaacgggcgtaccgaagtcggaatttgag
gtggtgaaatggggtaaagaccggtatgggaagtcacatcccaccgaatggaaggttaaa
gagggggtaaatacgggggcggaagtaaatattgacgatccagagttggttggtagtact
aaggggcctaaggtgccacatgttgggtatcaaacagaaggaaagcgggagagagggggg
agagtgcgaggtcatatactgctgcaggaggttccagtgagtagggaagggctgcgagat
aaaaaaaggagtggcaatagaaaatga
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integrated database retrieval system
