Pseudomonas oryziphila: EJA05_24505
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Entry
EJA05_24505 CDS
T07791
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pory
Pseudomonas oryziphila
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pory03400
]
EJA05_24505 (radA)
DNA repair and recombination proteins [BR:
pory03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EJA05_24505 (radA)
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GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DUF7125
AAA_16
DnaB_C
Rad51
GvpD_P-loop
AAA_22
AAA
SLFN-g3_helicase
RecA_N
nSTAND_NTPase5
nSTAND3
AAA_24
AAA_14
NTPase_1
ABC_tran
MCM
zf-C2H2_6
DUF7129
Motif
Other DBs
NCBI-ProteinID:
AZL70699
UniProt:
A0A3Q8U427
LinkDB
All DBs
Position
complement(5251818..5253185)
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AA seq
455 aa
AA seq
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MAKAKRLYGCTECGATFPKWAGQCGECGAWNTLVETMIESGGAAAPSGRAGWAGQQAQIK
TLAEVSVEEIPRFTTSSTELDRVLGGGLVDGSVVLIGGDPGIGKSTILLQTLCNIATQMP
ALYVTGEESQQQVAMRSRRLGLPQDQLKVMTETCIEAIIATARQEKPRVMVIDSIQTIFT
EQLQSAPGGVAQVRESAALLVRYAKQSGTAIFLVGHVTKEGSLAGPRVLEHMVDTVLYFE
GESDGRLRLLRAVKNRFGAVNELGVFGMTDRGLKEVSNPSAIFLNRTQEEVPGSVVMATW
EGTRPMLVEVQALVDDSHLANPRRVTLGLDQNRLAMLLAVLHRHGSIPTHDQDVFLNVVG
GVKVLETASDLALLAAVMSSLRNRPLAHDLLVFGEIGLSGEVRPVPSGQERLKEAAKHGF
KRAIVPKGNAPKEAPPGLQVIAVTRLEQALDALFE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggccaagcgtttgtatggctgtaccgaatgtggcgcgactttccccaaatgg
gccggccagtgcggcgagtgcggcgcctggaacaccctggtcgagaccatgatcgaaagc
ggcggcgcggcggcccccagcggtcgggccggctgggccgggcagcaggcgcagatcaag
accctcgccgaggtcagcgtcgaagagatcccgcgcttcaccaccagcagcaccgagctt
gaccgggtgctcgggggtggcctggtcgatggttcggtggtgttgatcggcggcgacccg
ggcatcggcaaatcgaccatcctgctgcagaccctgtgcaacatcgccacgcagatgccg
gcgctgtacgtcaccggcgaagaatcgcagcagcaggtggccatgcgctcgcggcgcctg
gggctgccccaggaccagctcaaggtcatgaccgaaacctgcatcgaggcgatcatcgcc
actgcccgccaggagaagccgcgggtgatggtgatcgactcgatccagaccattttcacc
gagcagctgcaatcggccccgggtggcgtggcccaggtacgcgaaagcgcggcgctgctg
gtgcgctatgccaagcagagcggcacggcgatcttcctggtcggccacgtcaccaaggaa
ggttcgctggccggcccgcgcgtgctggagcacatggtcgacaccgtgctgtatttcgag
ggtgaatcggacgggcgcctgcgcctgctgcgggcggtgaagaaccgctttggcgcagtc
aacgaactgggcgtgttcggcatgaccgatcgcggcctcaaggaagtctccaacccttcg
gcgatcttcctcaaccgtacccaggaagaggtgcccggcagcgtggtgatggccacttgg
gaaggtacccggccgatgctggtggaggtgcaggcactggtcgatgacagccacctggcc
aacccgcggcgggtgaccctgggcctggaccagaaccgcctggccatgctgttggcggtg
ctgcaccggcacggcagcatccccacccacgaccaggatgtgttcctcaacgtggtcggc
ggggtcaaggtgctggagaccgcctctgacctggcgctgctggcggcggtgatgtcgagc
ctgcgcaaccggccgttggcccacgacctgctggtgttcggcgagatcggcctgtctggc
gaggtgcgcccggtgcccagcggccaggagcgcctcaaggaggccgccaagcatggcttc
aagcgtgccatcgtgcccaagggcaatgcgccgaaagaggcgccgccgggcttgcaggtg
attgccgtgacgcgtctggagcaggccttggatgcattgttcgaatag
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