Pseudomonas oryziphila: EJA05_26900
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Entry
EJA05_26900 CDS
T07791
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
pory
Pseudomonas oryziphila
Pathway
pory03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pory00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EJA05_26900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pory03019
]
EJA05_26900
Messenger RNA biogenesis [BR:
pory03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EJA05_26900
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Nudt16-like
NUDIX_2
Motif
Other DBs
NCBI-ProteinID:
AZL71147
UniProt:
A0A3S8US80
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All DBs
Position
complement(5794049..5794528)
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AA seq
159 aa
AA seq
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MIDPDGFRPNVGIILTNDAGQVLWARRINQDAWQFPQGGINPDETPEDALYRELNEEVGL
ERDDVEILACTRGWLRYRLPQRLVRTHSQPLCIGQKQKWFLLRLVSNEQRVRMDLTGKPE
FDGWRWVSYWYPLGQVVTFKREVYRRALKELAPRLLTRD
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaccccgatggttttcgccccaatgtcgggatcattcttacgaatgatgccggg
caggtgctatgggctcggcggatcaaccaggatgcctggcagttcccccagggtggcatc
aaccctgacgagacgccggaagacgccctgtaccgcgagctgaatgaagaagtcggcctt
gagcgcgacgatgtggaaattcttgcctgcacccgtggctggttgcgttatcgtttaccc
cagcgcctggtgcgcacccacagccagccgctgtgcatcggccagaagcaaaagtggttc
ctgctgcgccttgtgagcaatgagcaacgggtgcgcatggacctgactggcaaaccggaa
ttcgacggctggcgttgggtcagctactggtatccgctgggccaggtggtgacattcaag
cgcgaggtctaccgacgcgccctgaaagagctagccccgcgcctgctgacgcgcgactga
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