KEGG   Pseudomonas oryziphila: EJA05_27945
Entry
EJA05_27945       CDS       T07791                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pory  Pseudomonas oryziphila
Pathway
pory00010  Glycolysis / Gluconeogenesis
pory00020  Citrate cycle (TCA cycle)
pory00260  Glycine, serine and threonine metabolism
pory00280  Valine, leucine and isoleucine degradation
pory00310  Lysine degradation
pory00380  Tryptophan metabolism
pory00620  Pyruvate metabolism
pory00630  Glyoxylate and dicarboxylate metabolism
pory00640  Propanoate metabolism
pory00670  One carbon pool by folate
pory00785  Lipoic acid metabolism
pory01100  Metabolic pathways
pory01110  Biosynthesis of secondary metabolites
pory01120  Microbial metabolism in diverse environments
pory01200  Carbon metabolism
pory01210  2-Oxocarboxylic acid metabolism
pory01240  Biosynthesis of cofactors
Module
pory_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pory_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pory_M00036  Leucine degradation, leucine => acetoacetate + acetyl-CoA
pory_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pory_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pory00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    EJA05_27945 (lpdA)
   00020 Citrate cycle (TCA cycle)
    EJA05_27945 (lpdA)
   00620 Pyruvate metabolism
    EJA05_27945 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    EJA05_27945 (lpdA)
   00640 Propanoate metabolism
    EJA05_27945 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    EJA05_27945 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    EJA05_27945 (lpdA)
   00310 Lysine degradation
    EJA05_27945 (lpdA)
   00380 Tryptophan metabolism
    EJA05_27945 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    EJA05_27945 (lpdA)
   00670 One carbon pool by folate
    EJA05_27945 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pory04147]
    EJA05_27945 (lpdA)
Enzymes [BR:pory01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     EJA05_27945 (lpdA)
Exosome [BR:pory04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   EJA05_27945 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox FAD_oxidored HI0933_like Pyr_redox_3 NAD_binding_8 AlaDh_PNT_C FAD_binding_2 GIDA Lys_Orn_oxgnase FAD_binding_3 DAO Thi4 Amino_oxidase Lycopene_cycl 3HCDH_N
Other DBs
NCBI-ProteinID: AZL71349
UniProt: A0A3S8USJ3
LinkDB
Position
6016642..6018042
AA seq 466 aa
MKSYDVVIIGGGPGGYNAAIRAGQLGMSVACVEGRSTLGGTCLNVGCMPSKALLHASELF
EAASGDEFAHLGIEVKPSLNLAQMMKQKDESVTGLTKGIEYLFRKNKVDWVKGWGRLDGV
GKVVVKAEDGSETTLQAKDIVIATGSEPTPLPGVTIDNQRIIDSTGALSLPQVPKHLIVI
GAGVIGLELGSVWRRLGAEVTVIEYLDRICPGTDAETAKTLQKALAKQGMTFKLGSKVTQ
ATPSADGVTLTLEPAAGGAAETLQADYVLVAIGRRPYTQGLNLESVGLETDKRGMLSNDH
HRSSVPGIWVIGDVTSGPMLAHKAEDEAVACIERIHGKPHEVNYNLIPGVIYTRPELATV
GKTEEQLKAEGRAYKVGKFPFTANSRAKINHETEGFAKVLADANTDEVLGVHLVGPSVSE
MIGEFCVAMEFSASAEDIALTCHPHPTRSEALRQAAMNVDGMAMQI
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgaaatcctatgacgtggtgatcatcggcggcggccccggcggctacaacgcagctatc
cgggccggccagctgggcatgagcgtggcctgcgtggaaggccgatcgaccctcggcggc
acctgcctgaacgtcggttgcatgccctccaaggcattgctgcacgcctccgaactgttc
gaggcggccagcggtgacgagttcgcgcacctgggcatcgaggtcaagccgagcctgaac
ctggcgcagatgatgaaacagaaggatgaaagcgtgaccggcctgaccaagggcatcgag
tacctgttccgcaagaacaaggtcgactgggtcaagggctggggccgcctggacggcgtc
ggcaaggtcgtcgtcaaggccgaggacggcagcgaaaccaccttgcaggccaaggacatc
gtcattgccaccggttccgaaccgaccccgctgccgggcgtgaccatcgacaaccagcgc
atcatcgactccaccggcgccctctccctgccccaggtgcccaagcacctgatcgtgatc
ggcgccggcgtgatcggcctggagctgggttcggtgtggcgccgcctcggcgccgaggtg
acggtgatcgagtacctcgaccgcatctgcccgggcaccgatgcggaaaccgccaagacc
ttgcagaaggccctggccaagcaaggcatgaccttcaagctgggcagcaaggtcacccag
gccacgccatcggccgatggcgtcaccctcaccctggaaccagcagccggtggcgccgcc
gaaaccctgcaagccgactatgtactggtggccatcggccgtcgcccgtacacccagggc
ctgaacctggagagcgtgggcctggagaccgacaagcgcggcatgctgagcaacgaccat
caccgcagttcggtcccgggcatctgggtgatcggcgacgtcacctccggcccgatgctg
gcgcacaaggccgaggacgaagccgtggcctgcatcgaacgcatccacggcaagccgcac
gaggtcaattacaacctgatcccgggcgtcatctatacccgcccggagctggccactgtc
ggcaagaccgaagagcagctcaaggccgaaggccgcgcctacaaggtcggcaagttcccc
ttcaccgccaacagccgcgccaagatcaaccatgagaccgaaggcttcgccaaggttctc
gccgacgccaacaccgacgaggtgctgggtgtgcacctggtcggcccgagcgtcagcgag
atgatcggcgagttctgcgtggccatggagttctcggcctcggccgaagacatcgccctc
acctgccacccgcacccgacccgctccgaagccctgcgccaggcggcgatgaatgtggat
gggatggcgatgcagatctga

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