Polaromonas sp. SP1: DT070_00160
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Entry
DT070_00160 CDS
T05689
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pos03032
]
DT070_00160
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_00160
Enzymes [BR:
pos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
DT070_00160
DNA replication proteins [BR:
pos03032
]
Prokaryotic type
DNA Topoisomerases
DT070_00160
DNA repair and recombination proteins [BR:
pos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
DT070_00160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AYQ26587
LinkDB
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Position
28047..30695
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AA seq
882 aa
AA seq
DB search
MTQFAKETLPISLEEEMRRSYLDYAMSVIVGRALPDARDGLKPVHRRVLFAMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDQSVYDTIVRMAQDFSLRHLLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHELLADLDKETVDFGPNYDGSEQEPLVMPTRLPNLLVNGSGGIAVGMAT
NIPPHNLNEVVDACLHMLKNPEASIDELMEIVPAPDFPTGGIIYGINGVKDGYRTGRGKV
VMRAKCHFEDIDKGQRQSIIVDELPYQVNKKTLQERMAELVHEKKIEGISHIQDESDKSG
MRLVIELKRGEVPEVVLNNLYKQTQLQDTFGINMVALVNGQPKLCNLKDLIQVFLSHRRE
VVTRRTVFTLRKARERGHVLEGLAVALANIDDFIAIIRNAPTPPVAKAELMLRPWDSSLV
REMLTRTRADGGVVNADDYRPDGLEKAFGMGSDGLYRLSETQAQEILQMRLQRLTGLEQD
KIVAEYKEVMAEIDDLLDILAKPERVSIIIGEELTAIKLEFGQTKLGARRSQIEHSSFDL
STEDLITPTDMVVTLSHTGYIKSQPLSEYRAQKRGGRGKQATATKEDDWVDQLFIANTHD
YILCFSNRGRLYWLKVWEVPAGSRGSRGRPIVNMFPLQEGEKITVVLPLTGEKRSFPADQ
YVFMATSMGTVKKTALDEFSNPRKAGIIAVDLDAGDYLIGASLTDGKHDVMLFSDGGKAV
RFDENDVRPMGRNARGVRGMTLEDGQGVIAMLVAEDEQQSVLTATQNGFGKRTSITEYTR
HGRGTKGMIAIQQSERNGKVVAATLVHVDDEIMLITDKGVLVRTRVSEIREMGRATQGVT
LIGLDEGSQLSGLQRIVENDATLDDIDPETDTGTDTPNTESN
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgacccagttcgctaaagaaaccctgcccatcagtcttgaagaggaaatgcggcgaagc
tatctcgactacgccatgagcgtcatcgtggggcgggccctccccgatgcaagggatggc
ctgaagccggtgcaccggcgcgtgctgtttgcgatgcatgagctgaacaacgactggaat
cgcccttacaagaagtcggcacgtattgttggcgacgtgatcggcaagtaccacccgcac
ggggaccagtcggtttatgacaccatcgtccgcatggcccaggatttttccttgcgccac
ttgctggtcgatggccagggcaacttcggttcggttgacggcgacaacgctgccgcgatg
cgttacacggaaatccgcctgtcgaaaatcgcccatgaactgctggccgacctggacaag
gaaactgtcgacttcgggccgaactacgacggcagcgaacaggaaccgctggtcatgccg
acccgcctgcctaacctgctggtcaacggatccggcggcatcgcggtgggtatggcaacc
aacatcccgccccacaacctgaacgaagtggtggatgcctgccttcatatgctcaagaac
cccgaggcttccattgacgagctgatggagatcgtgccggcaccggacttccccacaggc
ggcatcatctacggcatcaacggcgtcaaggacggctaccgcaccggccgcggcaaggtc
gtaatgcgcgccaaatgccacttcgaggacatcgacaagggccagcgccagtccatcatc
gttgacgagctcccctaccaggtcaacaaaaagacgctgcaagagcgcatggccgaactc
gtgcatgagaaaaaaatcgagggcatcagccacatccaggacgagagcgacaaatccggc
atgcgcctggtcatcgagctcaagcgcggtgaagtgcccgaggtcgtgctgaacaacctc
tacaagcagacccagctgcaggacaccttcggcatcaatatggtggcactggtcaacggc
cagcccaagctctgcaacctgaaggatttgatccaggtgtttttgtcgcaccgccgcgag
gtggtgacacgccgcacggtgttcacgctgcgcaaggcgcgggaacgcggtcacgtgctg
gaaggcctggctgtggccctggccaacattgacgacttcattgccatcatccgcaatgcg
ccaacgccgccggtagccaaggctgaattgatgctgcgcccctgggacagcagcctggtg
cgcgagatgctcacgcgcacgcgcgccgacggcggtgtggtcaacgcagacgactaccgt
cccgacggcctcgaaaaggccttcggcatgggcagcgacggcctgtaccgcctctcggaa
acgcaggcccaggaaatcctgcagatgcgcctgcagcgcctgacaggtcttgagcaggac
aagatcgtggccgagtacaaggaagtcatggccgaaatcgacgacctgctcgacatcctg
gccaaacccgagcgcgtgtccatcatcattggcgaagaactcaccgcaatcaagctggag
ttcggccagaccaagctgggcgcgcggcgcagccagatcgaacacagctccttcgacctc
agcaccgaagacctgatcactcccaccgatatggtggtgacgctttcgcacacaggctat
atcaaaagccagcccctgtcagagtaccgtgcgcaaaaacgcggcgggcgcggcaagcag
gccacggccaccaaggaagacgactgggttgaccagctcttcatcgccaatacacacgac
tacattctgtgcttttccaaccgcggccgcctgtactggctcaaggtgtgggaggtgccg
gcaggctctcgcggctcgcgcggccggcccatcgtcaacatgtttcccctgcaggaaggc
gaaaagatcaccgtggtcctgccactgacgggcgaaaaacgcagcttcccggccgaccag
tatgtctttatggccacctccatgggcaccgtgaagaagaccgccctggacgagttcagc
aacccgcgtaaagccggcatcatcgccgtggacctggacgcgggcgactatctgatcggc
gcgtcgctgaccgacggcaagcatgacgtgatgctgttcagtgatggcggcaaggctgtg
cgatttgacgaaaacgatgtgcgccccatgggccgcaacgcccgcggcgtgcgcggcatg
acgctggaagacggccagggcgtcatcgccatgctggtagccgaggacgagcagcaaagc
gtgctgacggccactcagaacggcttcggcaaacgcacttccatcaccgaatacacacgc
cacggccgcggcaccaaaggcatgatcgcgatccagcagagcgagcgcaacggcaaggtc
gtggcggcaacgctggtccacgtggacgacgaaatcatgctgattactgacaagggcgta
ctcgttcgcacacgcgtcagcgaaatccgtgagatgggcagggcgacacagggtgttacg
ctgatcggcctcgatgagggctcacaattaagcggtctccagcgcattgtcgaaaacgat
gccacgctggacgatatcgacccagaaaccgacaccggcacagacacccccaacacggaa
agcaattaa
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