Polaromonas sp. SP1: DT070_00455
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Entry
DT070_00455 CDS
T05689
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos03030
DNA replication
pos03410
Base excision repair
pos03420
Nucleotide excision repair
pos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DT070_00455
03410 Base excision repair
DT070_00455
03420 Nucleotide excision repair
DT070_00455
03440 Homologous recombination
DT070_00455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pos03032
]
DT070_00455
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_00455
Enzymes [BR:
pos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DT070_00455
DNA replication proteins [BR:
pos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DT070_00455
DNA repair and recombination proteins [BR:
pos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DT070_00455
NER (nucleotide excision repair)
GGR (global genome repair) factors
DT070_00455
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
Motif
Other DBs
NCBI-ProteinID:
AYQ26643
LinkDB
All DBs
Position
complement(92627..95461)
Genome browser
AA seq
944 aa
AA seq
DB search
MSTDKKTLLLVDGSSYLYRAFHAMPDLRANPGDPASPATGAIRGMVNMMQKLRKDVRADY
AACVFDAKGPTFRDALYPEYKAQRSPMPDDLRSQVEPIHEVVRLLGWTVLDVPGVEADDV
IGTLACMASQQGIEVIISSGDKDLSQLVDENITVIDTMNDRRRDMAGVEAEFGVPPRLMV
DYQTLVGDAVDNVPGVPKVGPKTAVKWLLEYGSLDALVARAGDIKGVVGDNLRQSLDWLP
KGRELLTIKKDCDLVEYIAGLPALDAISMGAQQTDALKAFYEKYGFKGLVKQIEIETTPP
ELIGGPQGRHAKPAAKAAVANPDAPGLFDEPAAAPQAPLAERTTNLRYDTIFTWEAFDAW
LAKIEAAELVALDTETTSLDEMRAEIVGLSFSVTPGEAAYIPLTHDYPDAPAQLPRDEVL
ARLKPWLENPAKAKLGQHVKYDRHVFANHGIEVQGYAHDTMLQSYVLEVTKPHGLASLAE
RHVGRSGINYEDLCGKGAHQIKFSQVDIAKAAEYSCEDSDQTLDVHRVLWPQLQANEKLR
FIYQLEMESSETLYRIERNGVLIDAPTLAAQSHELGQRIIQLETEAYEIAGQPFNLGSPK
QLGEIFFDKLGMPVIKKTPSGARSTDEEVLEKLAEDYPLPAKLLEHRSLSKLKGTYTDKL
AQLADPRTGRVHTHYAQAVAVTGRLSSNDPNLQNIPIRTVEGRRVREAFVAPAGSVIASA
DYSQIELRIMAHISGDEALLSAFTNGLDVHRATAAEVFGVPVDQVSSEQRRYAKVINFGL
IYGMSSFGLARNLGIETKAAAAYIDKYFQRYPGVKNYMDQTVVFAQENHFVETVFGRRLY
LSEINGGNGPRKKAAERQAINAPMQGTAADLIKLSMNKVQEVLDAEKRATKMIMQVHDEL
VFEVPESEVEWVRTEIPRLMAGVADLKVPLLAEIGVGPNWDKAH
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atgagtaccgacaaaaaaacgcttctcctggtggacggctccagctacctgtaccgcgcc
ttccacgccatgcccgacctgcgcgccaacccgggcgacccggccagccccgccacgggc
gccatccgcggcatggtcaacatgatgcaaaagctgcgcaaggatgtgcgtgccgactac
gcggcctgcgtgttcgacgccaagggcccgacgttccgcgatgcgctttaccctgaatac
aaggcccagcgctcccccatgcccgacgacctgcgcagccaggtcgagcccatccatgag
gtggtgcgcctgctgggctggacggtgctggacgtgccgggcgtcgaggccgacgacgtg
atcggcacgctggcctgcatggcctcgcagcagggcattgaagtcatcatctccagcggc
gacaaggacttgagccagctggtcgatgaaaacatcaccgtcatcgacaccatgaacgac
cgccggcgcgatatggccggggtcgaagcggagttcggcgtgccgccgcggctgatggtg
gattaccagactctggtcggcgacgcggtcgacaatgtgcccggcgtgcccaaggtcggc
ccgaagacggccgtgaaatggctgcttgaatacggctcgctggacgcgctggtggccagg
gctggcgacatcaagggcgtggtcggcgacaacctgcgccagtcgctcgactggctgccc
aagggccgcgagttgctgaccatcaaaaaagactgcgacctcgtggaatacattgccggc
ctgcctgccctggacgcgatttccatgggcgcccagcagacggacgccttgaaggccttc
tacgaaaaatacggcttcaagggtctggtcaaacaaatcgagatcgaaacaaccccgccc
gagttgattggcggcccccaagggcgccacgccaagcctgcggccaaagctgctgtcgcc
aacccggatgcaccggggctgtttgacgagccggccgctgcaccgcaggccccgctggcc
gagcgcaccaccaatttgaggtacgacaccatcttcacctgggaagctttcgatgcctgg
ctggcaaagattgaagcagccgagctggtagcgctggacaccgaaaccacctcgctcgac
gaaatgcgggctgaaatcgtcggcctgagtttcagcgtcacgcccggcgaagccgcctac
attccgctcacgcacgactaccccgacgcgcccgcgcaattgccgcgcgacgaggtgctg
gcgcgcctcaaaccctggctggaaaaccccgccaaagcaaagctgggccagcacgtcaag
tacgaccgccatgtgttcgccaatcacggcatcgaagtgcagggttatgcccacgacacg
atgctgcaaagctacgtgctggaagtgaccaagccgcacggcctggccagcctggccgaa
cggcacgtgggacgcagcggcatcaactacgaagacctgtgcggcaagggcgcgcaccag
atcaagttcagccaggtcgacatcgccaaggccgcggagtattcgtgtgaagactccgac
cagacgctggacgtgcaccgcgtgctctggccgcagctgcaggccaacgagaagctgcgc
ttcatctaccaactggagatggagagcagcgaaaccctctaccggatcgagcgcaacggc
gtgctgatcgatgcgcccacgctggccgcgcaaagccacgagctgggccagcgcatcatc
cagctcgaaaccgaggcgtatgagatcgcaggccagcccttcaacctgggcagccccaaa
cagctcggcgagattttctttgacaagctgggtatgcccgtcatcaagaaaaccccgagc
ggcgcgcgcagcaccgacgaagaagtgcttgaaaaactcgccgaagattacccgctaccc
gccaagctgctggagcaccgctcgctcagcaagctcaagggcacctacaccgacaagctg
gcgcagctggccgacccgcggacaggccgggtgcacacgcactatgcgcaggccgtcgcg
gtcaccgggcggctgtcgagcaacgaccccaacctgcaaaacatcccgatccgcacggtg
gaaggccggcgcgtgcgcgaggccttcgtggcgcccgcgggcagcgtcatcgccagcgcc
gactattcacagatcgagctgcgtatcatggcgcacatcagcggcgacgaagcgctgctc
agcgccttcaccaacgggctggacgtgcaccgcgccaccgccgccgaagtgttcggcgtg
ccggttgaccaggtcagcagcgagcagcgccgctacgccaaggtcatcaacttcggcctg
atctacggcatgagcagctttggcctggcgcgcaacctcggcattgaaaccaaggcggcg
gcggcctatatcgacaaatatttccagcgttatccgggcgtgaagaactacatggaccag
accgtggtcttcgcccaggaaaaccattttgtggagaccgtcttcgggcggcgcctctac
ctgtcagagatcaacggcggcaacggtccacgcaaaaaagcggccgagcgccaggccatc
aacgcgcccatgcagggcacggcggccgacctgatcaagctcagcatgaacaaggtgcag
gaagtgctggatgcagaaaagcgcgccaccaaaatgatcatgcaggtgcacgatgaactg
gtgttcgaagtgcccgaatccgaagtcgaatgggttcgcaccgagattccgcgcctgatg
gcgggggttgccgatctcaaagtgcctctgctcgccgagatcggcgtggggccgaactgg
gacaaggcgcactga
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integrated database retrieval system
