Polaromonas sp. SP1: DT070_01330
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Entry
DT070_01330 CDS
T05689
Name
(GenBank) LysR family transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pos03000
]
DT070_01330
Transcription factors [BR:
pos03000
]
Prokaryotic type
Helix-turn-helix
LysR family
DT070_01330
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AYQ26793
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Position
280170..281138
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AA seq
322 aa
AA seq
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MSDPRNAVRPTGVTIRQLRAFVAVAQDESVTRAAQRLHITPSALSMLISTLEGELAVRLF
ERTTRRISLTDAGLELLPSIRKVFDNLDQAFDGLRQLSDRRSGRFAVATSPLLAATLLPP
LLAGFRARFPSIRVDLFDLPVDEIAQAVRSGQADFGVCTADTDIPDLVATTLYQDRLMLA
CQGSHPLAGRREVRWAELVGEPLAVLRHGSGLRTLVEKGFADMGEPLQPAFEVAHVTTAV
GLVEAGLALSILPSYALSSARSPGVVAVPLTAPVMERNIVALTDGQRQLSAPCEAFLAHF
KSEVTVLAAVSVVKKVKRKAAG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatccccgaaacgccgtacgccccaccggcgtgaccattcgccagctgcgcgcc
tttgtggccgtggcccaggacgaaagcgtcacgcgcgcggcccagcgcctgcacatcacg
ccctcggcgctgtccatgctgatcagcacgctggaaggcgagctcgccgtgcgcttgttc
gaacgcacaacgcggcgcatctcgctgaccgacgccgggctcgagctgctgccttccatc
cgcaaagtctttgacaacctcgaccaggcgtttgacggcctgcgccagttgtcagaccgc
cgcagcggccgctttgccgtcgccacctcgcccctgctggcggccaccttgctgccgccg
ctgctggccggcttcagggcgcgctttccgagcattcgcgtcgacctgtttgacttgccg
gtcgacgagatcgcccaggcggtgcgcagcggccaggcggatttcggcgtgtgcacggcc
gacaccgacattcccgacctcgtcgccaccacgctgtaccaggaccgcctgatgctggcc
tgccagggcagccacccgctggccgggcggcgcgaagtgcgctgggcagaactcgtcggc
gaaccgctggcggtgctgcgccacggcagcggcctgcgcacgctggtcgaaaaaggtttc
gccgatatgggcgagccgttacagcctgcttttgaggtggcgcatgtcaccaccgctgtg
ggcctggtcgaggccgggttggcgctatccatcctgccgtcatatgcgctgtcgagtgcg
cgctcgcctggggtggtggctgtgccgctgacggcgccggtgatggagcgcaacatcgtc
gcgctcactgacgggcagcggcaactgtctgcgccttgtgaagcgtttctggcgcacttc
aagagtgaggtgacggtgctggcggctgtcagcgtggttaagaaggtcaagaggaaggct
gcgggttga
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