Polaromonas sp. SP1: DT070_01920
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Entry
DT070_01920 CDS
T05689
Name
(GenBank) IS21 family transposase
Organism
pos
Polaromonas sp. SP1
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Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_7
Sigma70_r4_2
HTH_IclR
HTH_24
TnsD
HTH_23
HTH_38
Phage_NinH
HTH_3
HTH_29
HTH_17
HTH_28
HTH_AsnC-type
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AYQ26898
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Position
401234..402778
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AA seq
514 aa
AA seq
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MIDVATLNVIRRWALRDQLSIREIARRTGLARNTVKKYLRSDEAEPRYARRVSSSKLDPY
AEKLATWLGIEATKSRKQRRTLRQIHTDLMALGFDGSYGRVAAFYRKWRLDRQEALRTAG
RGTFIPLIFGPGEAFQFDWSEDWAMIAGERTKLQVAHFKLSHSRAFSVRAYLLQTHEMLF
DAHNHAFGVLGGVPKRGIYDNMRTAVDKIRSGKERDVNARFNAMVNHYLFEAEFCNPASG
WEKGQIEKNVRDSRHRLWQPMPAFGTLIELNEWLEIRCKALWKEIAHGKLPGTVADVWAE
EKSFLMPPPPAFDGFVEHTKRVSPTCLVTHERTRYSVPASFANRPVSLRVYADRLVVAAE
GRLICEHQRIIDRRHDGAGHTVYDWRHYLAVLQRKPGALRNGAPFTEFPTAFKRLQALLL
KKPGGDREMVEILALVLHHDEQAVLAAVETSLEAGVATKTHILNVLHRLVGGKPAIPEII
APQALKLGTEPQANVRRYDSLREVEVDQEVRYGT
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
gtgatagacgtggcgacattgaatgtcatcaggcggtgggcattgagagatcagttgtcc
atccgcgagattgcaaggcgtacaggcctggctcgcaacacagtaaagaagtaccttcgg
tccgatgaggctgagcccaggtacgcaaggcgggtcagctcaagcaagctcgatccctac
gctgagaagctggccacctggctgggaatcgaggcaacaaaatcgcggaaacagcggcgc
actttgaggcagatccacacagatctaatggccctcgggttcgatggatcctacggaaga
gtggcagctttctaccggaaatggcggttagaccgtcaggaggcgcttcgaactgccggc
cgcggcaccttcattccgctgatatttgggccgggggaagcgtttcagtttgactggagc
gaggactgggcaatgattgccggcgagcgcaccaagctgcaggtggctcatttcaagcta
agccatagccgcgctttcagcgtccgagcctatctgctgcagacgcacgaaatgctattt
gacgcccataaccacgccttcggggtgctgggtggggtgccaaagcgcggcatctacgac
aacatgaggacggcagtagacaagattcgcagtggcaaagaacgagacgtcaatgctcgc
ttcaatgcaatggtgaaccactacctcttcgaggccgagttctgcaaccccgcctctggc
tgggaaaaggggcaaatcgagaagaatgtccgggattcccgtcatcgcctttggcaaccc
atgccggctttcggcaccttgatagagctgaatgagtggctcgagatacgttgtaaagcc
ctctggaaggagatagcccacggcaagctgccgggcacggtggctgatgtctgggcagaa
gagaagtcgtttctgatgcctccgccgccggcctttgacgggttcgtcgagcacacgaag
cgcgtttcacccacctgtcttgtgacccatgaacggacccgatacagcgttcctgcatcg
tttgccaatcgaccagtaagccttagggtgtacgcggaccgcttggttgttgctgcagaa
ggtcggctgatctgcgaacaccaaagaatcattgatcgccgccacgacggggcgggacac
accgtctatgactggcgtcactatttagctgtactgcagcgaaaacctggggccctaaga
aacggcgccccgttcaccgagttcccgaccgccttcaagcggttgcaggcattgctactc
aaaaagcctggcggggaccgtgagatggtggaaatactggcacttgttctgcaccatgac
gagcaagcggtactggcggccgtagagacctccctggaagcaggggtcgccaccaagacc
cacatactgaacgtattgcaccgcctggttggcggaaagccagccattcctgagatcatc
gctccgcaagcactgaaactcggtacagaaccgcaggccaacgtgcgtcgctatgactca
cttcgggaggtcgaggtcgaccaggaggtgcgatatggcacgtga
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