Polaromonas sp. SP1: DT070_02195
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Entry
DT070_02195 CDS
T05689
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pos03021
]
DT070_02195 (rpoH)
Transcription machinery [BR:
pos03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DT070_02195 (rpoH)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_25
Motif
Other DBs
NCBI-ProteinID:
AYQ30323
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Position
458781..459716
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AA seq
311 aa
AA seq
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MTAAVAAPQAGAVAAVNPWSLVPPLGNLDAYISAVNRLPMLTLEQEQEFAKNLKENNDLD
SAGKLVLSHLRLVVSISRKYLGYGLPHGDLIQEGNIGLMKAVKRFDPDQNVRLVSYAMHW
IKAEIHEYILKNWRMVKVATTKAQRKLFFNLRSMKQGFKDDADVATHRDTLTEGQIDSMA
KTLNVKREEVIEMEQRMSGGDVLLDPSPSDDGEDAFGPIAYLADATQEPTALMESRQRDN
LASDGITAALEDLDPRSRRIVEERWLKVNDDGSGGMTLHDLAAEYKVSAERIRQIEVAAM
KKMKKVLAAYA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
ctgacggctgccgtcgccgcaccccaagccggcgccgtggcagccgtcaacccttggtcg
ctggttccgccactcggtaacctggacgcgtacatttccgccgtgaatcgccttcccatg
ctcactttggagcaggagcaggaatttgccaaaaacctcaaggaaaacaacgaccttgat
tcagccggtaagttagtgctctctcacttgcgcctggtcgtgtcgatttcgcgcaaatac
ctgggttatggcctgccccacggcgacctgatccaggaaggcaacatcggcctgatgaag
gcggtcaaacgcttcgacccggaccagaatgtgcgcctggtgagctacgccatgcactgg
atcaaggccgagatccatgagtacatcctgaaaaactggcgtatggtcaaggtcgccacg
accaaggcccagcgcaagctgtttttcaacctgcgctcgatgaagcagggtttcaaggac
gacgccgatgtggcgacgcaccgcgacacgctgactgaaggccagatcgattccatggcg
aagacgctgaacgtcaagcgcgaggaagtcattgagatggagcagcgcatgtcgggcggt
gacgtgctgctggacccgagcccgagcgacgacggcgaagacgccttcggcccgatcgcc
tacctggccgacgccacgcaggagccgaccgcgctgatggaatcgcgccagcgcgacaac
ctggcctccgacggcattaccgccgcgctggaagacctggacccgcgctcgcgccgcatc
gtggaagagcgctggctcaaggtgaacgacgacggttcaggcggcatgacgctgcatgac
ctggcggccgaatacaaggtgagcgccgagcgcatccgccaaatcgaagtggcggccatg
aaaaaaatgaagaaggtgctggcggcttacgcgtaa
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