Polaromonas sp. SP1: DT070_02555
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Entry
DT070_02555 CDS
T05689
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_02555
Enzymes [BR:
pos01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
DT070_02555
DNA repair and recombination proteins [BR:
pos03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
DT070_02555
Prokaryotic type
DT070_02555
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
TRPM_tetra
Motif
Other DBs
NCBI-ProteinID:
AYQ27011
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All DBs
Position
529963..531432
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AA seq
489 aa
AA seq
DB search
MQKKYETGLMWFRRDLRVADNAALYHALKSCKQVYCAFVFDRGILDTLPRVDRRVEFIRE
SVLSLDGQIRRLGEAAGKPGACLLTAHHGAVDAVVQLAAELGADAVFANHDDEPRSLARD
AAVQAALEAGGKAFYSFKDHVIFERQEVLTLAGKPYTVFTPYKNAWLKKVDDFYLKPYPV
EKYGASLAPVSASRRTIPSLGDLGFEASNLSALKIPTGSEGGAQLFEDFTGRMAHYKETR
DFPAVKGPSYLGVHLRFGTVSIRQMASAALRQPSRDEGAATWLSELIWRDFYAQILANFP
HAVGGAFKPDYDAIAWESGDKAQALFQAWCDGRTGYPLVDAAMAQINQTGYMHNRLRMVT
ASFLVKDLGIDWRWGERYFAEKLNDFDLSANNGGWQWAASTGCDAQPYFRIFNPVSQSEK
FDAGGKFIRKYVPVLAQLPDKALHSPWLAKPLELAAAGVVLGTNYPMPIVQHDEARALTL
QRYAVVKKA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagaagtatgaaacagggctgatgtggttcaggcgtgacctgcgggttgcggac
aacgcagccctttaccacgcgctgaagtcatgtaagcaggtgtattgcgcctttgttttt
gaccgcggcatcctggacaccttgccgcgggtcgaccgccgcgtggaattcatccgggag
tcggtgctgagcctggacggccagatccggaggctgggcgaggcggccggcaagcccggc
gcctgcctgctgacggcccatcacggcgccgtcgatgcggtggtgcagctggcggctgag
ctgggcgccgatgcggtctttgccaaccacgatgacgagccccggtcgctggcgcgcgac
gctgcggtgcaagccgcgctcgaagccggcggcaaggccttttacagcttcaaggaccac
gtcatttttgaacgccaggaggtgctgaccctggcaggcaagccctacaccgtgtttacg
ccatacaagaatgcctggctgaagaaggtcgatgacttctacctcaagccctatcccgtc
gaaaaatatggtgcgtccctggcaccggtttcggccagcaggcgcactattccgtcgctg
ggcgatttggggtttgaagccagcaatctctcagcgctaaagattcccacgggcagcgaa
ggcggtgcccagctttttgaggacttcacgggccgcatggcgcactacaaggagacgcgc
gacttcccggccgtcaagggcccgagttacctgggcgtgcaccttcggttcggcaccgtg
tcgatacggcagatggcttcggcggccttgcgccagccctcccgggatgagggggccgcc
acctggcttagcgagctgatctggcgtgatttttacgcccagatcctggccaatttccca
cacgccgtcggcggtgcattcaagccggactatgacgcgattgcgtgggaaagcggcgac
aaggcccaggcgctgttccaggcctggtgcgatggccgcaccggctacccgctggtggat
gcggcgatggcccagatcaaccagaccggttacatgcacaaccgcctgcgcatggtgacc
gccagttttctggtcaaagacctcgggatcgactggcgctggggcgagcgttacttcgcg
gaaaagctcaatgactttgacctgtcggccaacaacggcggctggcaatgggcggcgagc
accggctgcgatgcgcagccttatttccgcatcttcaaccccgtcagccagagcgagaag
ttcgatgccggggggaagttcatccgcaaatatgtgcccgtgctggcgcaactgcccgac
aaggcgctgcacagcccctggctggcaaaaccgctggagctggccgctgcgggcgtggtg
ctgggcacaaactacccgatgcccatcgtgcaacatgatgaagcgcgggcgctgacgctg
cagcgctatgcggtcgtgaaaaaggcctga
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