Polaromonas sp. SP1: DT070_04375
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Entry
DT070_04375 CDS
T05689
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00061
Fatty acid biosynthesis
pos00071
Fatty acid degradation
pos01100
Metabolic pathways
pos01212
Fatty acid metabolism
pos02024
Quorum sensing
pos04146
Peroxisome
Module
pos_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
DT070_04375
00071 Fatty acid degradation
DT070_04375
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
DT070_04375
09145 Cellular community - prokaryotes
02024 Quorum sensing
DT070_04375
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pos01004
]
DT070_04375
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pos04147
]
DT070_04375
Enzymes [BR:
pos01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
DT070_04375
Lipid biosynthesis proteins [BR:
pos01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
DT070_04375
Exosome [BR:
pos04147
]
Exosomal proteins
Exosomal proteins of breast milk
DT070_04375
Exosomal proteins of breast cancer cells
DT070_04375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF2464
Motif
Other DBs
NCBI-ProteinID:
AYQ27335
LinkDB
All DBs
Position
927702..929648
Genome browser
AA seq
648 aa
AA seq
DB search
MQTTFPRLLLKHAAERPGAAAMREKEYGIWQAHSWAGMAQLVERIACGLHAAGLQRGEHV
VIIGANRPRLYATMLAAQSLGAVPIPLYQDAVGAECVFPITNADVRFALVEDQEQVDKLL
EIRSQCPQLDQIIYDDPRGLRNYAETGLQSLDSLLEKGEAFAAQQPGFFKAEVEKAHHDD
VAAMFFTSGTTGNPKGVVHTHNTLLDRAKAGADFDKLTAAEEVLAYLPPAWVGQNIFSYA
QWLACGYVVNCPESASTVTIDLKEVGPTYYFAPPRIFESLLTTVMIRMEDAGRIKRSMFN
YFMGVAKRAGPALMDGKPVGALDRLLYALGSVMVYGPLRNTLGFSRVRVAYTAGEAIGPD
LFTFYRSIGINLKQLYGSTETAVFVCLQPDNEARADTVGVPIAGVQIKVAENGEILVKSA
GLLKEYYKNPTATAEVLSADGWYHTSDAGFIDASGHLKIIDRVKDVGRIKGGANDGAMFA
PKYVENKLKFFPHIKEVVAYGDGREKVCVMINIDFDAVGNWAERRNLPYAGYTDLAQKPE
VYQLIKECVEKVNADLSVDTLLAGSQISRFLVLHKELDADDGELTRTNKVRRGFIADKYL
PLVDALYSGKTEQFIETVVKFEDGRSGSVSATLKIDDTKTFAPVKAAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcagaccacgttcccacgattgctgctcaaacatgcggccgaacgccccggcgccgcc
gccatgcgcgagaaggagtacggcatctggcaggcgcacagctgggccggcatggcccaa
ctggtcgagcgcatcgcctgcggcctgcatgcagccggcctgcagcgcggcgaacacgtg
gtcatcatcggcgccaaccgcccgcgcctttacgccaccatgctggcggcccagtcgctg
ggcgcggttccgattccgctgtaccaggacgccgtgggcgccgagtgcgtcttccccatc
accaacgccgacgtgcgctttgcgctggtggaagaccaggagcaggtcgacaagctgctg
gaaatccgcagccagtgcccgcagctggaccagatcatttacgacgacccgcgcggcctg
cgcaactatgccgagaccggcctgcagtcgctggattcgttgctggaaaaaggcgaggcc
ttcgccgcgcagcagcccggcttcttcaaggcggaagtcgaaaaagcccatcatgacgat
gtggccgcgatgtttttcacttccggcaccacgggcaaccccaagggcgtggtccacacc
cacaacaccctgctggaccgcgccaaagccggcgccgatttcgacaagctcaccgctgcc
gaagaagtgctggcctacctgccgcccgcctgggtcggccagaacatcttcagctacgcc
cagtggctggcctgcggctatgtggtcaattgccccgagagcgccagcacggtgacgatc
gacctgaaggaagtgggcccgacctattactttgcgcctccgcgcatttttgaaagcctg
ctgaccacggtgatgatccgcatggaagacgccggccgcatcaagcgcagcatgttcaat
tacttcatgggtgtggccaagcgcgccggccccgcgctgatggacggcaagccggtgggc
gcgcttgatcgcctgctgtatgcgctgggcagcgtcatggtctacggcccgctgcgcaac
acgctggggttttcgcgcgtgcgggtggcctacaccgccggcgaggcgattggccccgac
ctgttcaccttctaccgctccatcggcatcaacctgaagcaactctacggctcgacagag
actgccgtgtttgtctgcctgcagccggacaacgaagcgcgcgcggacaccgtgggcgtt
cccatcgcaggcgtgcagatcaaggtggccgagaacggcgagatcctcgtcaagtcggcc
ggcctgctcaaggaatactataaaaaccccacggcgacggccgaggtgctgagcgccgac
ggctggtaccacaccagcgacgcgggttttatcgacgccagcggccacctcaagatcatc
gaccgcgtcaaagacgtgggccgcatcaagggcggcgccaacgacggcgccatgtttgcg
cccaagtatgtggagaacaaactcaagttcttcccgcacatcaaggaagtcgtggcctac
ggcgacggccgtgaaaaagtctgcgtgatgatcaacatcgacttcgatgccgtgggcaac
tgggccgaacgccgcaacctgccttacgccggttacaccgacctggcgcaaaagcccgag
gtctaccagctcatcaaggagtgcgtcgagaaggtcaacgccgacctgagcgtggacacc
ctgctggcgggctcgcagatcagccgcttcctggtgctgcacaaagagctggacgccgac
gacggcgagctcacgcgcaccaacaaggtccgccgcggttttatcgccgacaaatacctg
ccgctggtcgatgcgctttacagcggcaagaccgagcagttcattgagacggtggtgaag
tttgaagacgggcggtctggcagcgtcagtgccaccttgaagatcgacgacaccaaaacc
tttgcccccgtgaaggcagcagcatga
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