Polaromonas sp. SP1: DT070_04955
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Entry
DT070_04955 CDS
T05689
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos03030
DNA replication
pos03430
Mismatch repair
pos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DT070_04955
03430 Mismatch repair
DT070_04955
03440 Homologous recombination
DT070_04955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pos03032
]
DT070_04955
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_04955
Enzymes [BR:
pos01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DT070_04955
DNA replication proteins [BR:
pos03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
DT070_04955
DNA repair and recombination proteins [BR:
pos03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
DT070_04955
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DUF5710
NOT2_3_5_C
Motif
Other DBs
NCBI-ProteinID:
AYQ27437
LinkDB
All DBs
Position
complement(1043305..1044360)
Genome browser
AA seq
351 aa
AA seq
DB search
MTGGQLGFGFDDDAAAAAQQGTPAARPRKPKAPPPAPAPVVTALPAAPGGDAEAMARALE
QHPDYRVLRRLVPATRFDHTPVGPVARVVILDTETTGLDASKDKVIELALVCVSVDLQTG
QPTGPVEVYDGLQDPGMPMPKIAREITGITDAMLAGQQLDMARIDSLLAGADLVIAHNAG
FDRPFVEDILSHTRELNWACSFAEIDWTAAGHSSAKLSYLASALGWFYDAHRAEMDCHAL
LTVLLAELPGQGVSGLAQLLAGAHTPSYRLQATGAPFAAKDLLKTRGYRWDSQGKVWHTR
LGGDAALQAECEWLQEAVFAGRSAKLQWERHDAKSRYSTRAGVAGWAQLSG
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgaccggcgggcaattgggcttcggctttgacgatgatgccgcggctgccgcgcaacaa
ggcacgcccgccgccaggccgcgcaagccaaaagcaccaccgcctgcgccagcgcctgtc
gttacggcgcttcctgctgcacctggcggtgatgccgaagcgatggcgcgcgcgctggag
cagcatcccgattaccgcgtgctcaggcgcctggtgccggcgacccgctttgaccacacg
ccggtggggccggtcgcccgcgtcgtgattctggacaccgaaaccaccgggctggacgcc
tccaaagacaaggtcatcgaactcgcactcgtctgcgtctcggtcgacctgcaaaccggg
cagcctacaggcccggtcgaggtttacgacgggctgcaggaccccggcatgccgatgccg
aaaatcgcgcgcgagatcaccggcatcaccgacgccatgcttgcgggccagcaactggac
atggcgcgcatcgacagcctgctggcaggcgccgacctcgtcattgcgcacaacgcgggc
tttgaccgtccttttgtcgaagacattctttcccatacccgtgagctcaactgggcctgc
tcgtttgccgagatcgactggacggcggcagggcacagctcggccaagctcagctacctg
gcctccgcgctgggctggttttacgatgcgcaccgcgcagagatggactgccacgcgttg
ctgacggtgttgctggccgaactgcccggacaaggcgtcagcggcctggcgcaactgctg
gccggcgcccacacgccgagctaccgcctgcaggccaccggcgcgccgtttgccgccaag
gacttgctgaaaacgcgcggctaccgctgggacagccagggcaaggtctggcacacccgg
ctgggcggcgatgccgcgctgcaggctgagtgcgaatggctgcaggaggccgtttttgcc
gggcgctccgcaaagctgcagtgggagcggcacgatgccaaaagccgctattccacgcgg
gcaggggtggctggctgggcgcagctttcgggctag
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