Polaromonas sp. SP1: DT070_06625
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Entry
DT070_06625 CDS
T05689
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00730
Thiamine metabolism
pos01100
Metabolic pathways
pos01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
DT070_06625
Enzymes [BR:
pos01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
DT070_06625
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GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
AYQ27729
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All DBs
Position
complement(1377502..1379421)
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AA seq
639 aa
AA seq
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MAKTRLTVDTQDLTSRITRAPFPGSAKIYIEGSRPDIRVPFREVTLTDTLVHEGAGEPRR
EANPPLRLYDASGVYTDPASPIDITRGLPPLRGAWINERQDTEALPGISSAYGRERLNDP
ALAALRMAHAPVPRRAKAGANVSQMHYARKGIITPEMEYIAVRENLVRAQLAERLATERM
PKKGHSFNAAIPEQITAEFVRDEVARGRAVIPNNINHPESEPMIIGRNFLIKVNANIGNS
AVTSSIEEEVDKLVWSIRWGADTVMDLSTGENIHETREWILRNSPVPIGTVPIYQALEKV
NGKAEDLTWEIFRDTLIEQAEQGVDYFTIHAGVRLAYVPLTANRLTGIVSRGGSIMAKWC
LSHHKESFLYERFDEICEIMKAYDVCFSLGDGLRPGSIADANDEAQFAELHTLGELTQIA
WKHDVQVMIEGPGHVPLQLVKENVDKQLEACFEAPFYTLGPLITDISPGYDHISSAMGAA
NIGWYGTAMLCYVTPKEHLGLPNRDDVKQGLIAYKIAAHAGDLAKGYPGAQMWDNAVSKA
RFEFRWEDQFRLAIDPDTAMAYHDETLPKENAKVAHFCSMCGPKFCSMKISQEVREFARL
NPATTTLAPAATTIPIKQIATGFEEKAKEFREGGSEIYS
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggccaaaacccgactcaccgttgacacccaagacctcaccagtcgcatcacgcgcgcg
ccttttccgggctccgcaaaaatctatatcgaaggctcgcgccccgacatccgcgtgcct
tttcgtgaagtcacgctgacggacacgctggtgcacgaaggcgccggtgagccgcgccgc
gaggccaacccgccgctgcgtttgtatgacgcttcgggcgtgtacaccgacccggcttcg
cccatcgacatcacgcgcggcctgccgccattgcgcggcgcctggatcaacgagcgccag
gacaccgaagccctgcccggcatcagcagcgcctacggccgcgaacgcctgaacgacccg
gccctggccgcgctgcgcatggcgcatgcgcccgtgccgcgccgtgccaaggcgggcgcc
aatgtgtcgcagatgcattacgcgcgcaaaggcatcatcacccccgagatggaatacatc
gcggtacgtgaaaacctggtgcgcgcccagctggccgagcgcctggccaccgaacgcatg
ccgaaaaaagggcattccttcaacgccgcgatcccggagcagatcaccgccgaatttgtg
cgcgacgaagtggcacgcggccgcgccgtcatcccgaacaacatcaaccaccccgagagc
gagccgatgatcatcggccgcaacttcctgatcaaggtcaatgccaacatcggcaattcg
gcggtcacctcaagcatcgaggaagaagtcgacaagctggtctggtcgatccgctggggc
gccgacaccgtgatggacttgtcgaccggcgagaacatccatgagacgcgtgaatggatc
ttgcgcaactcgccggtgcccatcggcacggtgccgatttaccaggcgctcgagaaagtg
aacggcaaggctgaagacctgacctgggaaatcttccgcgacacgctgatcgagcaggct
gagcaaggcgtggattacttcaccatccacgccggtgtgcgcctggcctatgtgccgctc
accgcgaatcgcctgacgggcatcgtctcgcgcggcggctccatcatggccaagtggtgt
ttgtcgcaccacaaggaaagctttttgtacgagcgctttgacgagatctgcgaaatcatg
aaggcgtatgacgtgtgcttctcgctgggcgacggcctgcgccccggctcgattgccgat
gcgaacgacgaagcgcagtttgccgagctgcacacgctgggcgagctcacgcagatcgcc
tggaagcacgacgtgcaggtgatgatcgaaggccccggccatgtgccgctgcagctggtg
aaggaaaacgtcgacaagcagctcgaggcctgctttgaagcgcccttctacacgctgggc
ccgctgatcaccgacatctcgccgggctacgaccacatctcttcggccatgggtgcggcc
aacatcggctggtacggcacggccatgctgtgctacgtgacgcccaaggagcacctgggc
ctgcccaaccgcgacgacgtgaagcagggcctgatcgcctacaagatcgccgcgcatgcg
ggcgacctggccaagggttacccgggcgcgcagatgtgggacaacgcggtctccaaggcg
cgctttgagttccgctgggaagaccagttccgcctggcgatcgaccccgacacggcgatg
gcctaccacgacgagacgctgcccaaagagaatgccaaggtggcgcatttctgctcgatg
tgcgggccgaagttctgctcgatgaaaatctcgcaggaggtgcgcgagtttgcgcggctg
aacccggccacgacgacgctggcgccggctgccacgacaatccccatcaagcagatcgcc
accggctttgaagaaaaggccaaagagttccgggaaggcgggagcgagatttattcttga
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