KEGG   Polaromonas sp. SP1: DT070_08500
Entry
DT070_08500       CDS       T05689                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
pos  Polaromonas sp. SP1
Pathway
pos03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    DT070_08500
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pos03400]
    DT070_08500
Enzymes [BR:pos01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     DT070_08500
DNA repair and recombination proteins [BR:pos03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     DT070_08500
 Prokaryotic type
     DT070_08500
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AYQ28054
LinkDB
Position
complement(1782766..1783491)
AA seq 241 aa
MDQLDAITPSPDRLTSADPAAWPVAPGWRPTTEAFFGSATGQKLLGFLQSRLVAGATIFP
PQPLRALELTPPEEVRVVILGQDPYHGLGQAEGLAFSVAPGVALPPSLRNIFKELQRDLG
TPPPAFPVPGGSLVKWATHGVLLLNTCLTVEEAQPASHAGKGWEVLTDTLIRQVADGDHP
VVFMLWGAHAQSKRALIDAKRHKVLVANHPSPLSALRPPLPFIGCGHFSEARAWRDAQGK
S
NT seq 726 nt   +upstreamnt  +downstreamnt
atggaccagctcgacgccattacaccttcgcctgatcgcctcaccagcgccgaccccgcc
gcctggccggtggcgcccggctggcggccgaccaccgaggctttttttggcagcgcgacc
ggccagaagctgctgggctttttgcaaagccgcctggtggccggcgcgacgattttcccg
ccccagccgctgcgcgcgctggagcttacgccgcccgaagaggtgcgcgtggtcatcctg
gggcaagacccatatcacggcttgggccaggccgaggggctggcgttttccgtcgcgccc
ggcgtggccttgccgccgtcgctgcgcaacatttttaaagagctgcaacgcgacctgggc
acgccgccgcccgcctttccggtgcccggcggcagcctggtgaagtgggcgacgcacggc
gtgctgctgctcaacacctgcctcacggtcgaagaagcccagcccgccagccacgccggc
aaaggctgggaagtcttgaccgacaccttgatccgccaggtggccgacggcgaccatcca
gtggttttcatgttgtggggcgcccatgcccagagcaagcgggcgctgatcgacgccaag
cgccacaaggtgctggtggccaatcacccctcgccgctgtcagccctgaggccgccgctg
ccctttatcggctgcgggcatttttcggaagcgcgggcctggcgcgatgcgcagggtaaa
agctga

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