Polaromonas sp. SP1: DT070_09555
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Entry
DT070_09555 CDS
T05689
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DT070_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pos03400
]
DT070_09555
Enzymes [BR:
pos01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DT070_09555
DNA repair and recombination proteins [BR:
pos03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DT070_09555
RecFOR pathway proteins
DT070_09555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
nSTAND3
Mg_chelatase
AAA_16
AAA_14
TIP49
AAA_22
Rad17
AAA_3
AAA_18
RNA_helicase
NTPase_1
Bac_DnaA
DUF815
TsaE
Sigma54_activ_2
ABC_tran
AAA_17
NB-ARC
AAA_33
bpMoxR
AAA_28
AAA_24
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AYQ28237
LinkDB
All DBs
Position
2024535..2025608
Genome browser
AA seq
357 aa
AA seq
DB search
MSIQTDDFSAGDFPPAKRVMSAAPASPGEEAIERALRPKLFDEYVGQTKVRDQLEIFIGA
AKKRSEALDHVLLFGPPGLGKTTLSHIIAHELGVNLRQTSGPVLEKPKDLAALLTNLEKN
DVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGML
TNPLRDRFGIVARLEFYTPDELARIVRRSAKLLNAPMDEEGGFEIARRSRGTPRIANRLL
RRVRDYADVKGSGHISLDIANKALAMLDVDPQGFDVMDRKLLEAVIHRFDGGPVGLDNIA
ASIGEERDTIEDVIEPYLIQQGYLQRTPRGRIATLAAYRHLGVAQPQQGQDFFGAGT
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcaaaccgacgatttctctgcaggcgactttccgcccgccaagcgcgtgatg
tcggcggcgcccgcctcacccggcgaagaggcgattgagcgcgcgctgcgccccaagctg
tttgacgaatacgtcggccagaccaaggtgcgcgaccagctggagatcttcatcggcgcc
gccaaaaaacgcagcgaggcgctggaccatgtgctgctcttcggcccgcccggcttgggc
aaaaccacgctgtcgcacatcattgcgcatgagctgggcgtaaacctgcggcagacctcc
ggcccggtgctggaaaaacccaaggacctggccgcgctgctcaccaatcttgaaaagaac
gacgtccttttcatcgacgaaatccaccgcctgagcccggtggtcgaggaaatcctttat
cccgcgctggaggactaccagatcgacatcatgatcggcgaaggcccggcggcgcgcagc
atcaagctcgacttgcagcccttcaccctggtgggcgccaccacacgtgccggcatgctg
accaacccgctgcgcgatcgttttggcatcgtggcgcggctggagttttatacgcccgac
gaattggcccgcatcgtgcggcgcagcgccaagctgctgaatgcaccgatggacgaagag
ggcggctttgaaatcgcccgccgctcacgcggcacgccgcgcatcgccaaccgcctgctg
cgccgcgtgcgcgactacgccgacgtcaagggcagcggccacatctcgctcgacatcgcc
aacaaggcgctcgccatgctggatgtggatccgcaaggctttgacgtgatggaccgcaag
ttgctggaagccgtcatccaccgcttcgacggcggcccggtaggcctggacaacatcgcc
gccagtatcggcgaagagcgcgacacgattgaagacgtgatcgagccgtatctgatccag
cagggctacttgcagcgcacgccgcgcgggcgcatcgccacgctggccgcttaccgccac
ctgggtgtggcgcagccccagcaggggcaggactttttcggcgccggcacataa
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