Polaromonas sp. SP1: DT070_12095
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Entry
DT070_12095 CDS
T05689
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pos03009
]
DT070_12095
Enzymes [BR:
pos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
DT070_12095
Ribosome biogenesis [BR:
pos03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DT070_12095
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AYQ28700
LinkDB
All DBs
Position
2569074..2570147
Genome browser
AA seq
357 aa
AA seq
DB search
MRATPAQPVAAAPAPQATLVTVDEDYAGQRLDNFLIRQLKGVPKTHVYRIIRSGEVRVNK
GRAQADTRVETGDIVRLPPVRTSERAGQKAEAMAQEIARHGASSTTGGYAPSREFPILFE
DDFVLAIDKPAGVAVHGGSGVSFGVIEQLRMARPEADFLELVHRLDRETSGILLIAKRRM
ALKLLQEQFRERETDKVYLALVGGDWPANHRVIDKALHKYLLPDGERRVKVVPNEHPDGM
RSVTLVKVKSAFPASPLAPATPFTLLEVTIKTGRTHQIRVHLSNEGHPIAGDDKYGDFEL
NKALQKSAAGAVSLKRMFLHAWSLKFNHPKLRKVVHLQAPLPPELQQFLPATSEDIA
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
gtgcgcgcaacccccgcgcagcctgtggcggccgcgccggcgccccaggccactttggtg
acggtggatgaggactacgccggtcagcggctggacaatttcctgatccgccagctcaag
ggcgtgcccaaaacccatgtctaccgcatcatccgcagcggcgaagtgagggtgaacaaa
ggccgggcgcaggccgatacgcgggtggaaacgggcgacatcgtgcgcctgccgccggtg
cgcacctctgaacgggccgggcaaaaggccgaagccatggcccaggaaatcgcccggcac
ggcgccagctcgaccaccggcggctacgcgccgtcgcgcgaattccccatcctgtttgaa
gacgactttgtgctggccatcgacaaaccggccggcgtggccgtgcacggcggcagcggc
gtgagttttggcgtcatcgagcagctgcgcatggcgcggcctgaggccgacttcctcgag
ctggtgcaccggctggaccgggaaaccagcggcatcctgctgatcgccaagcggcgcatg
gcgctcaagctgctgcaggagcagttccgggagcgtgaaaccgacaaggtttacctggcg
ctggtgggcggcgactggccggccaaccaccgcgtgatcgacaaggcgctgcacaagtat
ttgctgccggacggcgagcggcgcgtgaaagtggtgcccaacgagcatcccgacggcatg
cgttcggtgacgctggtcaaggtgaagtcggcctttcccgccagcccgctggcgcccgcg
acgccttttaccttgctcgaagtcaccatcaagacgggccgcacccaccagatccgcgtg
cacctgtccaacgaaggccacccgattgccggggacgacaaatacggtgacttcgaactg
aacaaggcgctgcaaaaatccgccgccggcgcggtatcgctcaagcgcatgttcctgcat
gcctggagcctgaagttcaaccatcccaaactgcgcaaggtcgtgcacctgcaggcgccc
ttgccacccgagttgcagcaattcctgcctgcgacatctgaggacatcgcttag
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