Polaromonas sp. SP1: DT070_12290
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Entry
DT070_12290 CDS
T05689
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pos03016
]
DT070_12290
Enzymes [BR:
pos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
DT070_12290
Transfer RNA biogenesis [BR:
pos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DT070_12290
Prokaryotic type
DT070_12290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
PD40
Motif
Other DBs
NCBI-ProteinID:
AYQ28735
LinkDB
All DBs
Position
complement(2608367..2609161)
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AA seq
264 aa
AA seq
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MRIALGVSYSGSAYEGWQSQLSGNTVQDKLELALAKFAAQPIRTLCCGRTDAGVHALMQV
VHFDTPLQRDIASWVRGTNTFLPSDIAVQWAREVPDEFHCRGSAIARRYAYVVLESPVRP
SVEAGRVGWVYRPLDGAAMREAITHLIGEHDFSSFRAAQCQAKSPVKTISRIDISERAGT
GSKYWRFEFEANAFLHHMIRNIMGCLVAVGQGNYPPGWLAEVRDARSRDAAAPTFSPDGL
YFLGPVYEARYGLPTRTAAYDWLP
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
gtgaggattgcactcggcgtcagctacagcggtagtgcttacgagggctggcaaagccag
ctctcgggcaacaccgtacaagacaagctggagctcgccctcgcaaaatttgccgcccag
ccgatccgtaccctctgctgcggccgcaccgacgccggcgtgcatgcgctgatgcaggtc
gtgcacttcgacacccccctgcagcgcgatatcgcttcatgggtgcgcggcacaaacacc
ttcctgccttcagacatcgccgtccaatgggcgcgggaagtccccgacgagtttcattgc
cgcggcagcgccatcgcacgacggtacgcgtatgtcgtgctggaatcgccggtgcgcccc
agcgtcgaagccgggcgtgtcggctgggtctaccggccgctggacggcgccgccatgcgc
gaggcgatcacgcacctcatcggcgaacacgacttcagctctttccgggccgcgcagtgc
caggccaagtctcccgtcaaaaccatcagccggatcgacatttccgagcgcgccggaaca
ggctcaaagtactggcgcttcgagttcgaggccaacgcttttttgcaccacatgatccgc
aacatcatgggttgcctggtagccgtcggccagggcaattacccgcctggctggctggcc
gaggtgagggacgcgcgcagccgcgatgccgccgcacccaccttttcaccggatggcctg
tactttctgggccctgtctacgaagcccgctacggcttgcccacccgcactgcagcctac
gactggctgccatga
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