Polaromonas sp. SP1: DT070_16390
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Entry
DT070_16390 CDS
T05689
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pos03016
]
DT070_16390
Enzymes [BR:
pos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
DT070_16390
Transfer RNA biogenesis [BR:
pos03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
DT070_16390
Prokaryotic type
DT070_16390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AYQ29459
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All DBs
Position
3440879..3441925
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AA seq
348 aa
AA seq
DB search
MTQTSSHRQKIQRRPVHGVLLLDKPLGLSSNQALQKAKWLLRADKAGHTGTLDPLATGVL
PLCFGAATKFSQIQLDADKTYEAVLLLGQKTTTADAEGDVIETRPVPEITPALLEALTAR
FTGPLAQIPPMYSALKKDGKALYEYARKGEDVEREARHITIFKLNMALAQDSRAPAAIKI
IVTCSKGTYIRTLGEDIGEAIGCGAHLGSLRRLETGGYGTQQCVTLPALEAMTEPEREAC
LLPAQSLVSAYPSVTLDADNAGRFLSGLRRRGEPGQWGADAPLVQVYGTAPPAFLGSAHV
TADELIPQRLLSPIEIQDILQAAKTRAELFSPDPAAAPTGAEAPSFQH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaaacctcttcacatcgccagaaaatccagcgacgtcccgtgcacggcgtgctg
ctgctcgacaagccgctgggcctgtcgagcaatcaggccttgcagaaggccaaatggctg
ctgcgcgccgacaaggccggccacaccggcacgctggacccgctggccaccggcgtgctg
ccgctgtgcttcggcgcggcgaccaaattcagccagatccagctcgacgccgacaagacc
tacgaggccgtgttgctgctgggccagaaaaccacgacagccgacgccgaaggcgacgtg
atcgaaacccggcctgtgcccgagatcacgcccgccttgctcgaggccctgacggcgcgt
ttcaccggcccgctggcgcagatcccgccgatgtactcggcgctcaagaaagacggcaag
gcgctgtatgaatacgcccgcaagggcgaagacgtggagcgggaagcccgccatatcacg
attttcaagctgaatatggctctggcccaagacagccgtgcacctgctgctatcaaaata
atagtgacctgcagcaaaggcacctacatccgaacgctgggcgaagacatcggcgaggcc
atcggttgcggcgcccacctcggctcgctcaggcggctggagaccggcggctacgggacg
cagcagtgcgtgaccttgccggcgctggaggccatgaccgagcccgaacgcgaagcctgc
ctgctgccggcgcagtcgctggtgtcggcgtacccgtctgtcacattggacgccgacaat
gcagggcggtttttaagcggcctgcgccgccggggcgagcccggccagtggggcgccgat
gcgccgctggtgcaggtttacggcactgcacccccggccttcctgggctcggcccatgtg
acggccgacgaattgattccgcagcgtctgctgagcccgattgaaatacaggacatcctg
caagccgccaaaacgcgtgccgaacttttttcacccgatcccgctgccgcgcccaccggc
gccgaagctccttctttccaacattaa
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