Polaromonas sp. SP1: DT070_18080
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Entry
DT070_18080 CDS
T05689
Name
(GenBank) rRNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pos03009
]
DT070_18080
Enzymes [BR:
pos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DT070_18080
Ribosome biogenesis [BR:
pos03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DT070_18080
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AYQ29753
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All DBs
Position
complement(3803852..3805459)
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AA seq
535 aa
AA seq
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MTQQDPPASESVDTPAEDQTKVASQEQPVRETPEVILPVEVDTPPQRSAKGRNAQPVVGA
IRFEDVVTGQFDADEEDVALAPPKRVLSPQPETPKLHKVLAQAGLGSRLEMEQLILEGRI
SVNAEPAHIGQRIQFGDTVKVNGKPIRLRIDPPPPRVIAYHKPTGEVVTHDDPQNRPTVF
RRLPKLFQGKWQSVGRLDLNTEGLLLLTSSGELANKLMHPRFGLEREYAVRVLGALNNEE
KKRLLDGVTLDDGVAQFSSIEAGGGEGANCWYRVTISEGRNREVRRMFEAVGHAVSRLIR
IRYGAMVLPRGLKRGAFVELDERDIWALTSALTRSESRADSRATAGSQQPGAPGNDGGEP
RHGRGPRRNERPRGGRDRFPAPPANMGASDAAPQDGAEQDPDDLQPPLPRNDSAPRSNRR
RGGKGRGQGGNAGPGSRSGPPAGNGLQGQKRRDDRGDRGDKLPGGAQPDPMKTSFGYIGA
DTFTRQRQGQGQQRRGGPGMGGGNNASGQRRGGGGNGGGNRGGGNRGGGSRGGNR
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacccaacaagaccctcccgcctccgaatctgtggatacgcctgctgaggaccaaacc
aaagtggcgtcccaagagcagcctgtacgggagactcccgaagtgatcttgcctgtggaa
gttgatacgccgccgcagcgttccgccaagggtcggaacgctcagcctgttgttggcgcg
ataaggtttgaagacgtggtgacggggcagtttgacgctgatgaagaggatgttgccctc
gcaccgcccaagcgagtgctttcgccgcaacctgaaactccaaagctgcacaaggtgctg
gcccaggctggcttgggctctcgccttgaaatggagcagctcattctggaggggcgcatt
tcggtcaatgccgagccggcccacatcggccagcgtatccagttcggcgatacggtcaag
gtgaacggtaagccaatccggctgcgcatcgatccgccgccgccgcgggtgattgcgtat
cacaagcccaccggcgaagtcgtcactcacgacgatccgcagaatcgcccgacggttttt
cggcggttgcccaaactgttccaggggaaatggcaatcggtgggtcgtcttgacctgaac
accgagggattgctgttattgaccagttccggcgaactggccaacaagctgatgcaccct
cgcttcggccttgagcgcgaatatgcggttcgagtgctgggtgcattgaacaatgaagag
aaaaagcggctgctcgatggtgtgactctggacgacggtgtcgctcaattcagctcaatt
gaggccggtggcggcgagggcgccaactgttggtaccgcgttaccatttccgagggccgc
aaccgcgaagtccggcgcatgttcgaggccgttggccacgcggtcagccgcctgatccgt
attcgctatggcgccatggtgctcccgcgcggcctcaagcgtggtgcatttgtcgagctg
gacgaacgcgatatctgggccctgaccagcgcattgacgcgctcagaatctcgtgccgat
tcgcgcgcaaccgcaggaagccagcagcctggcgcgccgggcaatgatggcggcgaaccg
cgccatgggaggggcccgcgcaggaacgagcggccgcgtggcggccgcgaccgtttcccg
gcgccgccggccaacatgggcgcatctgacgccgcgccgcaagacggcgccgagcaggat
cccgatgatttgcagccgccgcttccccgcaatgattcggcgccccgcagcaaccgccgc
cgcggcggaaaagggcggggacagggcggaaacgccggccccggctcgcgttcgggccca
cccgccggcaacggcctgcaaggacaaaaacggcgcgacgaccgcggggatcgcggcgac
aagctacccggcggcgctcagccggacccgatgaaaacatcgtttggctacataggagcg
gataccttcacgcgccagcgccaaggccaaggtcagcaacgccgcggcgggccgggtatg
ggcggtggaaacaatgccagcggccagcgtcgcggcggcggggggaatggcggtggaaac
cgcggaggcggcaaccggggcggcggaagtcgtggcggcaaccgctaa
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