Polaromonas sp. SP1: DT070_18395
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Entry
DT070_18395 CDS
T05689
Name
(GenBank) filamentous hemagglutinin N-terminal domain-containing protein
Organism
pos
Polaromonas sp. SP1
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Beta_helix
NosD
Motif
Other DBs
NCBI-ProteinID:
AYQ29811
LinkDB
All DBs
Position
complement(3869187..3874043)
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AA seq
1618 aa
AA seq
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MQADLYFPVLPVIPALPALPALRRKSFALKALPAAVALLFSPAGWTIDIAGGAGLPQNGT
VFSGTISPCVAGCVAGNQLTINQTSARAVVDWASFNIDAGKAVQILQPGAGSAMLNRVTG
DANPSQILGSLTAPGTVMLMNPNGVMFGQTATVNVGSLIATTGNIDVNNFINTGGALITG
AAGSITNEGSITAQGAGLVALVAPSVTNQGSITATGGTIALGGSTAATVSLNGGLYEFAI
PTGATGNSVSNTAGASLDGATLRLGVGDAANLLSGVINLEGVQQASNAIVVNGHAVVLKS
ALQAPNVSGNANRVDVYSGARIQDAVNIAKTGSPGAGAAVDVHAGNYAEQVALNKANMTL
TGLAGAKIEVPDTAGQLNGISITANNVTVTGMEIAGPVNQPYTSYAWGSGITRGIAVANG
VTGFTIANNNIHDVRNGILIDGRNTGSVTGNRIENTKSAISVQYTDGAGITLAGNSQGPV
GNEWGMNLHLNGYLSGGNILSNPMAAAPTLGWQQSLLALSAANGGWSVQDQAYTSSNRTH
VNVAANGAGGAQGSLLNPLGSIQAGVDAVVTGGTVNVAAGNYSGSVVIGKSLTLDGAGAG
QTVLRSAAAGAGDAVTINNASNVTLSDLSIADYLYGLRLNGTSNNVTVNRVAFNNNTFGM
RNGTATRADNFRMLNSSITGGQIGVQTYNGYQMVGGQPVATGSFANALFENVTIDGPTFK
GFYLETANDLTLRNVTVSNAGNYGAPASSSQHQQYGAGIDINLKYDAFNSINFDNVVVKN
SGYSSNSPTAAAVVIKTRGIAGDSTDYTAAPASLQSVNISGGSIEDSARTGLRVETLRNG
SGGQPTVTISGGTQFKNNGQDISVDAVKVDARGAVFVGAADGFAIEDRVTHALDATGRGL
VTWTDGNVYVTQNSGSLQRGVDAVVAGGTVNVGSGTHVQARTVTVDRSMTLAGAGQGSTV
IDASGVNGYGIQVTADNVSLRDFTLYGPSANVAASYGIKVAPSGGASARLHNFSISNVTS
RGAGRAELDLNGVDGAVIDHVTADGAPVGNNSGSTQGAGIQLTDSANVTITNSTTRNNAW
GGLALYQANRAYNQQMNNITVAANNSFTERNPVYLQDESASRDFGTLNIAGFDFAVRNAS
TANSNNQYTWLQASQQNAFDFAVNLGSSASSYVQGWNGAQATQNFHVGTGNLLGGGSQAM
SIGTALGNAANGAGINVGAGTYAENVVVSNPFNLFFNGATVHSLSLTSGAAGSGVSGTVT
ADGAGGIVFNAPVSLLGDTTLATQGADITLNGDIQNAGSTARALSLLAGSGANRGNVHMV
SGGTEANALGRLEVVSNGYSLDSTLWVKGYGIDALGNVALSDHTLRGQDASATNTLNAGG
DVSGSTISLGAVQVTSGGDVSANVTASTVAVAAVGDVTGTTTSQGNVQITSSTGDITGSI
SGNNVTVQAQGDVNVNVVASGSASLAGDSVVANVVAPVVEVAAVSDAHLSGSSSQVTMNA
PSGTVSGNFGQVTNSGSGLVNVNGRPQGNQQLSSNAENNRVIPTGSSQAEGNGADEPVLQ
LAQAGVLASGGEQAVGRSKPSGAGEAIDNGQAVELDMSPGHEGESGKDGKDGKEKEKD
NT seq
4857 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgatctttactttccggtcctcccggtcatcccggcccttccggcccttccg
gcgctgcgccgcaaatccttcgcactgaaagcgctccccgccgcggtggcgctgctgttt
tcaccggcgggctggacgatagacatcgccggcggtgcgggcctgccgcaaaacgggacg
gtgttttccgggacgatctccccctgcgtcgccggctgcgttgctggcaaccagctgacc
atcaaccagacgagcgcgcgggccgtggtggactgggcgtccttcaacatcgatgccggc
aaggcggtgcagatcctgcagcccggcgcggggtccgccatgctcaaccgggtcacgggc
gacgccaacccttcgcagattctcggcagcctcacggcgcccggcaccgtcatgctgatg
aacccgaacggcgtgatgttcggacagaccgccaccgtgaatgtgggttcgctcattgcc
accaccggcaacatcgatgtgaacaatttcatcaataccggcggcgcgctgatcaccggt
gctgcaggcagcatcaccaacgagggcagcattaccgcgcagggcgccgggctggtggcg
ctggtcgcgccctcggtcaccaaccagggcagcatcaccgccaccggcggcacgatcgcg
ctggggggcagcacggccgccacggtgtcgctgaacggagggctttatgaattcgccatc
cccacgggcgccaccggcaacagcgtgtccaacacggcaggcgccagcctggacggcgcc
accttgcgcctgggcgtcggcgatgccgccaacctgctgtcgggtgtgatcaacctggaa
ggcgtgcagcaggccagcaacgccatcgtcgtcaacggccacgccgtggtgctcaagtcg
gcgctgcaggcgcccaatgtcagcggcaacgccaaccgggtggacgtgtacagcggcgcg
cgcatccaggacgcggtgaacatcgccaagaccggcagcccgggtgcgggcgcggcggtc
gatgtgcatgccggcaactatgcagagcaggtggcgctcaacaaggccaacatgacgctg
accggcctggcgggcgcgaagatcgaggtgcccgacacggccggccagctcaacggcatc
agcatcacagccaacaacgtgacggtcaccgggatggagatcgccggccccgtcaaccag
ccttacaccagttatgcctggggttcgggaatcacccgcggcatcgcggtcgccaacggc
gtgaccggcttcaccatcgccaacaacaacatccacgatgtgcgcaacggcatcctgatc
gacgggcgcaacaccggcagcgtgaccggcaaccggattgaaaacaccaagagcgccatc
tcggtgcaatacaccgacggcgccggcatcaccctggccggcaacagccaggggccggtc
ggcaacgagtgggggatgaacctgcacctgaacggctatctgtcgggtggaaatattctc
agcaaccctatggctgcggcgccgacgctggggtggcagcaatccctgctggccctgagc
gcggccaacggcggctggtcggtgcaggaccaggcgtatacctcgtccaaccgcacgcat
gtgaacgtggcggccaacggcgccggcggcgcgcagggcagcctgctcaacccgctaggc
agcatccaggccggcgtggacgccgtggtgacgggcggcacggtgaatgtggcggccggc
aattacagcggcagcgtcgtcatcggcaagtcgctgacgctggacggcgcgggcgccggg
caaaccgtgctgcggtcggccgccgcgggcgccggcgacgcggtgaccatcaacaacgcc
tccaacgtcacgctgtccgacctgtccatcgccgactacctgtacgggctgcgccttaac
ggcacttcgaacaacgtgacggtcaaccgcgtggccttcaacaacaacaccttcggcatg
cgcaacggcacggcgacccgcgccgacaacttccgcatgctcaacagcagcatcaccggc
gggcagatcggcgtgcagacctacaacggctaccagatggtgggcggccagccggtcgcc
acgggctcttttgccaatgccctgtttgagaacgtcaccatcgacggcccgaccttcaag
ggcttttacctggagaccgccaacgacctgacgctcaggaacgtcaccgtcagcaacgcc
ggcaactacggcgcgccggccagttcgtcgcagcaccagcagtacggcgcgggcatcgac
atcaacctgaagtacgacgccttcaattcgatcaacttcgacaacgtggtggtcaaaaac
tcgggctacagctccaatagcccgacggctgcggcggtggtgatcaagacgcgcggcatc
gccggcgacagcacggactacaccgcggcgccggccagcctgcaaagcgtcaatatttcg
ggcggcagcatcgaggactccgcccgcaccggcctgcgtgtggaaaccctgcgcaacggc
agcggcggccagcccacggtcaccatcagcggcggcacccagttcaaaaacaacgggcag
gacatctcggtggacgccgtgaaggtggacgcccgcggcgccgtctttgtcggcgcggcc
gacggttttgccattgaagaccgcgtgacccacgcgctggacgccaccggccgcggcctg
gtgacctggacggacggcaatgtctatgtcacgcaaaacagcggcagcctgcagcgcggt
gtcgacgccgtcgtggcgggcggcacggtgaacgtgggcagcggcacccatgtacaggcc
cgcaccgtcacggtggaccgcagcatgacgctggccggtgctggccaggggtccaccgtg
atcgatgcgagcggcgtgaacggctacggcatccaggtcacggcggacaacgtgtcgctg
cgggacttcacgctgtacggcccgagtgccaatgtggccgcgtcctacggcatcaaggtg
gcgccttcgggcggcgcgtcggcgcggctgcacaacttttcaatcagcaacgtcaccagc
cgcggcgcgggccgggccgagctcgacctgaacggcgtggacggcgcggtcatcgaccac
gtcacggccgacggcgcgccggtgggcaacaacagcggcagcacgcagggcgccggcatc
cagctgaccgacagcgccaatgtgacgatcaccaattcgaccacgcgcaacaacgcttgg
ggcggcctggcgctctaccaggccaaccgcgcctacaaccagcagatgaacaacatcacg
gtggcggccaacaacagctttaccgagcgcaacccggtctacctgcaggacgagtcggcc
agccgcgacttcggcacgctcaacatcgccggctttgactttgccgtgcgcaacgccagc
acggccaatagcaacaaccagtacacctggctgcaggcctcgcagcaaaacgccttcgac
ttcgccgtcaacctgggcagctcggcctccagctatgtgcagggctggaacggcgcgcag
gccacgcagaacttccacgtcggcaccggcaacctgctgggcggcggcagccaggcgatg
tccatcggcacggcgctgggcaacgcggccaacggcgccggcatcaacgtgggtgcgggc
acctatgccgagaacgtggtggtgagcaacccgttcaacctgttctttaacggcgccacc
gtgcacagcctttcactcacaagcggcgcggcaggctccggcgtcagcggcacggtgaca
gccgacggcgccggcggcatcgtgttcaatgcgcccgtcagcctgctgggcgacaccaca
ctcgccacccagggcgccgacatcacgctcaacggcgacatccagaatgccggcagcacg
gcccgcgcgctgagcctgctggccggctcaggcgccaaccgcggcaatgtgcacatggtg
tcgggcggcaccgaggccaacgcgctcggccggctggaggtggtgtccaacggctacagc
ctggacagcacgctgtgggtcaagggctacgggattgacgcgctgggcaatgtcgcgctg
agcgaccacaccctgcgcgggcaggatgccagcgccaccaacacgctgaacgccggcggc
gacgtcagcggctccaccatcagtctgggcgccgtgcaggtcaccagcggcggcgacgtc
tcggccaacgtgacggccagcacggtggcagtggccgccgtcggcgacgtgacgggcacc
accaccagccagggcaatgtgcagatcaccagcagcacaggcgacatcaccggcagcatc
agcgggaacaacgtgacggtgcaggcacagggcgatgtgaatgtgaatgtggtggcctcg
ggctccgcttcgctggccggcgattctgtcgtcgccaacgtcgtcgcgcccgtggtggaa
gtggccgccgtcagcgatgcccatctgtccggctcgtcgtcccaggtcacgatgaacgcc
cccagcggcaccgtcagcggcaacttcgggcaggtcaccaattcgggcagcggcctggtc
aacgtgaacggcaggccccagggcaaccagcagctgtcgtccaacgcggagaacaaccgc
gtgatccccaccggcagcagccaggccgagggcaacggcgccgatgagcctgtgcttcag
ctggcccaggccggcgttttggcaagcgggggagagcaagccgtgggccgcagcaaaccg
tccggcgccggcgaggccatcgacaacggccaggcggtcgagctggacatgtcgccaggc
catgaaggggaaagcgggaaggacgggaaggacgggaaggaaaaggagaaagactga
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