KEGG   Polaromonas sp. SP1: DT070_18450
Entry
DT070_18450       CDS       T05689                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
pos  Polaromonas sp. SP1
Pathway
pos00010  Glycolysis / Gluconeogenesis
pos00020  Citrate cycle (TCA cycle)
pos00260  Glycine, serine and threonine metabolism
pos00280  Valine, leucine and isoleucine degradation
pos00310  Lysine degradation
pos00380  Tryptophan metabolism
pos00620  Pyruvate metabolism
pos00630  Glyoxylate and dicarboxylate metabolism
pos00640  Propanoate metabolism
pos00670  One carbon pool by folate
pos00785  Lipoic acid metabolism
pos01100  Metabolic pathways
pos01110  Biosynthesis of secondary metabolites
pos01120  Microbial metabolism in diverse environments
pos01200  Carbon metabolism
pos01210  2-Oxocarboxylic acid metabolism
pos01240  Biosynthesis of cofactors
Module
pos_M00009  Citrate cycle (TCA cycle, Krebs cycle)
pos_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
pos_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
pos_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:pos00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    DT070_18450 (lpdA)
   00020 Citrate cycle (TCA cycle)
    DT070_18450 (lpdA)
   00620 Pyruvate metabolism
    DT070_18450 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    DT070_18450 (lpdA)
   00640 Propanoate metabolism
    DT070_18450 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    DT070_18450 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    DT070_18450 (lpdA)
   00310 Lysine degradation
    DT070_18450 (lpdA)
   00380 Tryptophan metabolism
    DT070_18450 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    DT070_18450 (lpdA)
   00670 One carbon pool by folate
    DT070_18450 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pos04147]
    DT070_18450 (lpdA)
Enzymes [BR:pos01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     DT070_18450 (lpdA)
Exosome [BR:pos04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   DT070_18450 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Biotin_lipoyl Pyr_redox FAD_oxidored GIDA Biotin_lipoyl_2 Thi4 FAD_binding_2 Pyr_redox_3 AlaDh_PNT_C NAD_binding_8 GCV_H FAD_binding_3 HlyD_D23 HI0933_like HlyD_3 Peptidase_M23 NQRA_N Lsr2_DNA-bd Lycopene_cycl
Other DBs
NCBI-ProteinID: AYQ29822
LinkDB
Position
complement(3889074..3890924)
AA seq 616 aa
MSASSLVDIKVPDIGDFDEVSVIEVLVKAGDTIKAEQSLITVESDKASMEIPSSAAGVVK
EIKVKLGDKVKQGSVVLTIESTGAAAAPAAPTADSAPKQAAAQAAPVPAAPKTVATPAPT
AASFAGSADLDCDLVVLGAGPGGYSAAFRAADLGLKVVIVERYATLGGVCLNVGCIPSKA
LLHVAAVMDEVKHFGSVGVSFGEPTVDINKLRTHKETVVGKLIGGLAAMAKMRKVTVVRG
YGNFVGANHIEVEETSGTGQDKTGKKQTIAFKNCIIAAGSQAVRLPFMPVDPRVVDSTGA
LDLKEVPKRMLILGGGIIGLEMGTVYSTLGARLDVVEMMDGLMQGADRDLVKVWQKMNAP
RFDNIMLKTKTVGAKATKAGIEVTFEGEGAPAPQTYDLVLQAVGRSPNGKKISAEKAGVS
VSDRGFIPVDIQMRTNVPHIFAIGDIVGQPMLAHKAVHEGHVAAEVIAGELQGNKELASA
AFNARVIPSVAYTDPEIAWVGLTEDQAKAQGIKVKKGLFPWTASARAIANGRSEGFTKLL
FDDSPEAHGHGKILGGGIVGTHAGDMIGEIALAIEMGADAVDIGKTIHPHPTLGESMGMA
AEVAHGSCTDLPPPRK
NT seq 1851 nt   +upstreamnt  +downstreamnt
atgagcgcatccagcctggtagacatcaaggtgccggacattggcgattttgacgaagtg
tccgtgattgaagtgctggtcaaggccggcgacaccatcaaggccgaacaaagcctgatc
accgttgaaagcgacaaggcgtcgatggaaatcccgtcgtcggcggccggtgtggtcaag
gaaatcaaggtcaaactcggcgacaaggtcaagcagggctccgtcgtgctgacgatcgag
agcaccggcgcggccgcagcacccgcagcccccacagcagattcagcaccaaaacaggct
gcagcccaggctgctcctgtacctgccgctcctaaaactgtagcaactccggcccccacg
gccgccagctttgcgggctccgccgacctggattgcgacctggtggtgctgggcgccggc
cccggcggctattccgccgccttccgcgcggccgacctgggcctgaaggttgtcatcgtc
gagcgctacgccacgctgggcggcgtctgcctgaatgtgggctgcattccttccaaggcg
ctgctgcatgtggcggccgtgatggacgaagtcaaacacttcggcagcgtgggcgtgagc
tttggcgaacccacggtcgacatcaacaagctgcgcacccacaaggaaaccgtggtcggc
aagctcatcggcggcctggccgccatggccaagatgcgcaaggtcaccgtggtgcgcggc
tacggcaattttgtcggtgccaaccacatcgaggtggaagaaacctccggaaccggccag
gacaaaaccggcaaaaaacaaaccatcgccttcaagaactgcatcatcgcggcgggctcg
caggctgtgcgcctgccgttcatgccggtcgatccacgcgtggtcgattccaccggcgcg
ctggacctcaaagaagttcccaagcgcatgctgattttgggcggcggcatcatcggcctt
gaaatgggcacggtgtattccaccctgggcgcgcgcctcgacgtggtcgagatgatggac
ggcctgatgcagggcgccgaccgcgacctcgtcaaggtctggcagaagatgaacgcaccg
cgttttgacaacatcatgctcaagaccaaaaccgtgggcgccaaggcgaccaaggccggc
attgaagtcacgtttgaaggcgagggcgccccggcgccgcaaacctacgacctggtgctg
caggccgtgggccgctcgcccaacggcaaaaaaatctcggccgaaaaagccggcgtcagc
gtgtccgaccgcggctttatccccgtcgacatccagatgcgcaccaatgtgccgcacatc
ttcgccatcggcgacatcgtcggccagcccatgctggcgcacaaggctgtgcatgaaggc
catgtggcggctgaagtcatcgccggtgaactgcaaggcaacaaggaactcgccagcgcc
gccttcaatgcgcgcgtgatccccagcgtcgcctacaccgaccccgaaatcgcctgggtc
ggccttaccgaagaccaggccaaggcgcaaggcatcaaggtcaagaagggcctcttcccc
tggacggcctccgcacgcgcgattgccaacggccgcagcgaaggcttcaccaagctgctg
tttgacgacagcccggaggctcacggccacggcaagatcctgggcggcggcattgtcggc
acccacgccggcgacatgatcggcgagatcgccctcgccatcgagatgggcgccgacgcc
gtcgacatcggcaagaccatccacccgcaccccacactgggcgagagcatgggcatggcc
gcggaagtggcacacggcagctgcaccgatttgccgccacctcgcaagtaa

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