Polaromonas sp. SP1: DT070_18540
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Entry
DT070_18540 CDS
T05689
Symbol
bamA
Name
(GenBank) outer membrane protein assembly factor BamA
KO
K07277
outer membrane protein insertion porin family
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pos03029
]
DT070_18540 (bamA)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pos02000
]
DT070_18540 (bamA)
Mitochondrial biogenesis [BR:
pos03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
DT070_18540 (bamA)
Transporters [BR:
pos02000
]
Other transporters
Pores ion channels [TC:
1
]
DT070_18540 (bamA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
POTRA_2
PorP_SprF
Motif
Other DBs
NCBI-ProteinID:
AYQ29840
LinkDB
All DBs
Position
complement(3911975..3914272)
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AA seq
765 aa
AA seq
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MQKQINRFKVRAVCAIAAGLFAASSAWAVDPFTVRDIRVEGLQRVEPGTIFASLPFRVGE
TYNDDKGATAIRALFGLGLFKDVRLEVSGDVLVVIVEERPTVADVDFVGTKEFDKEALKK
ALREAGIADGQPFDKALADKAEQELKRQYINKSLYGVEVITTVTPIERNRVNLTFSVVEG
DVAKIKEIHITGNKAFSESTLLGLFDLDTGGWLSWYTKSDRYSRTKLNADIETLRSYYLS
RGYLEFKIDSTQVAISPDKQSIAITVNVSEGERFVVSGVKLEGNYLSKEEEFKTLVKIEP
GEPYNADHVAETTKAFTDYFGTFGFAFARVEAVPEIDRTNNRVSFVLQADPSRRAYVRRV
NIAGNNRTRDEVVRREFRQFESSWYDGDKIRLSRDRVDRLGFFTDVNMDTQEVTGTTDQV
DVTVNVVEKPTGNLQLGAGYSSADSVSLLFGIKQENVFGSGNYLGIELNTSKSNRQVVLS
TIDPYFTADGISRTIDVYDRTAKPLSGQGGDYSLKTRGASIRFGVPFTENDTVYFGSGYE
QLTIVPGTNLPVSYQTYANQFGNKSDSIPLTVGWSRDSRDSALVPTAGRYQRLYGDWGVA
GDIKFVRANYQIQQYIPLNKQFTIALNGEFGWGKGLNGQPYPLFKNYYSGGLGSVRGFEQ
GSLGPRDASDLATGGPKKVTLNAELVAPFPGAGNDRTLRMFGFVDMGNVFGEKESYSFTD
MRVSTGVGISWISPVGPLRIAIATPLRKKPGDRIERLQFQIGTSF
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacaaataaatcgtttcaaagttcgtgcagtttgcgccatcgccgccggtctt
tttgccgccagttccgcttgggctgtcgacccgttcaccgtccgtgatatccgggttgaa
ggccttcagcgcgtagagccgggcaccattttcgcgtcgcttccctttcgtgtcggcgaa
acctacaacgacgacaaaggtgcaacggccattcgggccttgtttggcctgggcctgttc
aaggacgtgaggcttgaagtcagtggcgatgtgctggtggtgatcgtggaagaacgtccc
accgttgccgatgtggacttcgtcggcaccaaggaattcgataaagaggcgctcaagaag
gcgcttcgcgaagccggcatcgcagacggccagccctttgacaaggcgcttgccgacaag
gccgagcaggagctcaagcgccagtacatcaacaagagcctgtacggcgtcgaggtgatt
accaccgtgaccccgattgagcgcaatcgcgtgaacctgactttcagcgtggtcgaaggc
gacgttgcaaaaatcaaggaaatccacatcaccggcaacaaggcattcagcgagtcgacg
ctgctcgggctgtttgaccttgacaccggcggctggctcagctggtacaccaagtccgac
cgttattcgcgcaccaagctcaacgcagacattgaaaccttgcgctcctactatctttca
cgcgggtacctggaattcaagattgactccacccaggttgcgatttcgccggacaagcaa
agtattgccatcacggtgaacgtttccgagggggagcgtttcgtggtgtcgggcgtcaag
cttgagggcaactacctgagcaaggaagaagagttcaagacgctggtgaaaattgagccg
ggtgagccctacaacgcggaccatgtggccgaaaccaccaaggcgtttaccgactacttt
ggcacgtttggattcgcctttgcgcgcgtcgaagcagtgccggagattgaccgcaccaac
aaccgcgtttcttttgtgcttcaggccgacccgtcccgccgggcctatgtccgccgcgtc
aacattgcgggcaacaaccgtacgcgtgatgaagtcgttcgccgcgagttccgccagttc
gagtcttcctggtatgacggcgacaagattcgcctttcgcgcgatcgtgtcgaccgcctt
ggattctttaccgacgtgaatatggatacccaggaagttaccggcacgaccgatcaggtt
gatgtgacggtgaatgtggttgagaagcccaccggcaacctgcaactgggtgcgggttat
tccagtgcggacagcgtctccctgttgttcggtatcaagcaggaaaacgttttcggttcc
ggcaattacctcgggattgaactcaataccagcaagtcgaaccggcaggttgtgttgagc
acgatcgatccttacttcacagccgacggcatttcacgcacgattgatgtgtatgaccgc
acggccaagccgctttccggccagggcggcgattattccctgaaaacccgcggtgcgagt
atccgcttcggtgtccctttcaccgagaacgacacggtttattttggcagcggctatgag
cagctcaccattgttcccggcaccaacctgccggtcagctaccaaacctacgccaaccag
ttcggcaacaaaagcgactccattcccctgacagtgggttggtcgcgcgacagccgggac
agcgcgctggtccccaccgccggccgctaccagcgcctgtatggcgactggggtgtggcg
ggcgacatcaagtttgtgcgtgccaattaccagattcagcagtacatccccctcaacaag
cagttcaccatcgccctgaatggcgagttcggttggggcaagggcctgaatgggcagccc
tacccgctgttcaagaattactattcaggcggcctggggtcggtgcgcgggtttgagcag
ggatcgctgggcccacgtgacgcctctgatctggcgacgggtggcccgaagaaagtgacc
ttgaacgcagagctcgttgcaccattcccgggcgcaggaaatgacagaacgttgcgtatg
tttggttttgtcgatatgggcaacgttttcggcgaaaaggaaagctacagctttaccgat
atgcgggtgtccaccggtgtaggtataagctggatttctccggtggggccattgcgcatt
gccattgcgacgcccctgcgcaaaaagcctggcgatagaatagagcggttgcaattccaa
attggtacatctttctaa
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