Polaromonas sp. SP1: DT070_18620
Help
Entry
DT070_18620 CDS
T05689
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pos03009
]
DT070_18620
Enzymes [BR:
pos01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
DT070_18620
Ribosome biogenesis [BR:
pos03009
]
Prokaryotic type
ribosomal protein modification factors
DT070_18620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM_2
CLP1_P
YajR_YAM
Methyltransf_2
Motif
Other DBs
NCBI-ProteinID:
AYQ29855
LinkDB
All DBs
Position
complement(3930190..3931599)
Genome browser
AA seq
469 aa
AA seq
DB search
MSEVISPPVSVNTRPAPRVGFVSLGCPKALTDSELILTQLSAEGYQTSKTFEGADLVIVN
TCGFIDDAVKESLDTIGEALAENGKVIVTGCLGAKAGEGGGNLVRQMHPSVLAVTGPHAT
QEVMDAVHLNLPKPHDPFVDLVPNAFGIAGIKLTPKHYAYLKISEGCNHRCTFCIIPSMR
GDLVSRPIGDVLNEARALFEGGVKELLVISQDTSAYGVDVKYRTGFWDGKPVKTRMLELV
QALGEIAEPYGAWVRLHYVYPYPSVDEVLPLMATGKVLPYLDVPLQHSHPDVLKRMKRPA
SGEKNLERIARWREICPEIVIRSTFIAGFPGETEAEFEHLLDFMREAKIDRAGCFAYSAV
EGATANDIPGMLPIELREERRARFMAVAEAVSSQKLQQRIGATMQVLVDSAPALGRKGGT
GRSYADAPEIDGVVKLLPPEKISKTLKVGEFTRARIVGTQGHDLVAVPV
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagttatttccccacccgtatccgttaacaccaggcccgcgccgcgcgtgggt
tttgtcagcctgggctgccccaaggccctgaccgattccgagctgatcctcacgcagttg
agcgcagagggctaccagacctccaaaacctttgagggcgctgacctggtcatcgtcaac
acctgcggcttcattgacgacgcggtgaaggaaagcctggacaccatcggtgaggcgctg
gccgagaacggcaaggtcatcgtgaccggttgccttggcgccaaggcgggtgagggcggc
ggtaacctggtacgccagatgcaccccagtgtgctggccgtgacaggcccacacgccacg
caggaagtgatggatgccgtccacctgaatttgcccaagccgcacgacccgtttgtggac
ctggtgcccaacgctttcggtattgccggcatcaagctcacgcccaaacattacgcctac
ctgaagatcagcgaaggctgcaaccaccgctgcaccttctgcatcatcccatccatgcgc
ggcgacctggtgtcgcggcccatcggcgatgtgctcaacgaagcacgtgcactgtttgag
ggcggcgtgaaggaattgctggtgatcagccaggacacctcggcctacggcgtggacgtc
aaataccgtaccggcttctgggacggcaagcccgtcaagacgcgcatgctcgagctcgtc
caggcgctgggcgagatcgccgagccctatggcgcctgggtgcgcctgcattacgtctac
ccctacccaagtgtggatgaagtgctgccgctgatggccaccggcaaggttttgccatac
ctggacgtgcccctgcaacacagccatccggatgtcctcaaacgcatgaagcggccggcc
agcggagagaaaaatcttgagcgcatcgcgcgctggcgcgagatttgccccgagatcgtc
attcgcagcaccttcatcgccggtttccccggcgagaccgaagctgaattcgagcacctg
cttgatttcatgcgcgaagccaaaatcgaccgtgcaggctgctttgcctatagcgccgtg
gaaggcgccacggcgaacgacattcccggcatgctgccgatcgaattgcgtgaagagcgg
cgcgcccgcttcatggcggtggcagaggcggtgtccagccagaaattgcagcagcgcatc
ggtgcaaccatgcaggtgctggtagattcggcgccggccttgggccgcaagggcggcaca
gggcgttcttacgccgatgcgcccgagatcgacggcgtggtcaagctgctgccgcccgaa
aaaatcagcaagacgctgaaggtgggggaattcacccgcgcccggatcgtcggaacccag
ggccatgacctggttgccgtgcctgtttga
DBGET
integrated database retrieval system
