Polaromonas sp. SP1: DT070_19665
Help
Entry
DT070_19665 CDS
T05689
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
DT070_19665
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pos01007
]
DT070_19665
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pos03016
]
DT070_19665
Enzymes [BR:
pos01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
DT070_19665
Amino acid related enzymes [BR:
pos01007
]
Aminoacyl-tRNA synthetase
Class II (U)
DT070_19665
Transfer RNA biogenesis [BR:
pos03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
DT070_19665
Prokaryotic type
DT070_19665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
AYQ30038
LinkDB
All DBs
Position
complement(4178630..4181056)
Genome browser
AA seq
808 aa
AA seq
DB search
MQFPESWLREFCNPPLTTQQLADTLTMAGLEVEELKPVAPPFTKIVVGEIKEAVQHPDAD
RLRVCQVDVGQGSLLNIVCGAPNARVGIKVPCALVGAELPPGEDGKPFLIKVGKLRGVES
QGMLCSARELKLSEDHGGLLELAADAPLGQDIREHLLLDDTLFTLKLTPNLAHCLSVYGV
AREVAALTAAPLKTPAIPAVKATDATKLPVKISAPDLCGRFSGRVVRNVNTKASTPQWMV
DRLARCGQRSVTALVDISNYVMFELGRPSHIFDLDKIHGGLDVRWGKPGETLKLLNGNTV
TVDEKVGVIADDEQVESLAGIMGGDATSVSDDTKNVYVEAAFWWPKAIAGRSRRYNFSTD
AGHRFERGVDPGQTVEHIERITQLIIDICSTADTACGPMDDQQVNLPKAAPVTLRVARAA
KVIGMPLTQAQCLDALQRLGLPVAQGEGTLTVTPPSYRFDLQIEEDLIEEVVRMVGYNQL
PETPPLAPITARLRAEAERSPFGVRRALASLGYQETINFSFVEERWEHELAGNPNPIKLL
NPIASQMSVMRSSLLGSLLQVLKFNLDRKAPRVNVFELGRVFLRDAQSQNTDTTVAGFNQ
PMRVAGLAYGPRAALNWSQPDKAVDFFDIKGDVEALLAPLKAVFAPAAHPAMHPGRCASV
SVGGRAIGFVGELHPQWRQGYDLAQAPLLFELELDAVLQRQVPEFKPVSKLQPVERDIAV
IVAEGVTHAALMSAIHGANTQGLLKGATLFDVYRPQQASASMQMGEKSLAVRLVLSSDAA
TLTDEEIEAAVQAVLANLQGQLGARLRA
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcccagaatcctggttgcgcgaattctgcaacccgcctttgacgacccagcag
ctcgccgacacgctcaccatggccggcctggaggttgaagaactcaagccggtggcgccg
cctttcaccaagatcgtggtgggcgaaatcaaggaggccgtccagcacccggacgccgac
cgcctgcgcgtctgccaggttgacgtggggcagggcagcctgctcaacatcgtctgcggc
gcgcccaacgcccgcgtcggcatcaaggtgccgtgcgcactggtcggcgccgagttgccg
cccggcgaagacggcaaacccttcctgatcaaggtcggcaagctgcgcggcgttgaaagc
cagggcatgctgtgctccgcgcgtgaactcaagctctctgaagaccacggcggcctgctc
gaactggcggccgacgcgccgctgggccaggacatccgcgagcacctgttgcttgacgac
accttgttcaccctcaagctcacgcccaacctggcgcattgcctgagcgtgtacggcgtc
gcgcgtgaagtcgccgcgctcacggcggcgccgctgaagacgccggctattcccgccgtg
aaggccacggacgccaccaagctgccggtgaagatcagcgcacccgatttgtgcggccgc
ttctccggccgtgtggtgcgcaacgtcaacaccaaggccagcactccgcaatggatggtc
gaccgcctggcccgctgcggccagcgcagcgtgacggcgctggtcgacatctccaactac
gtgatgttcgagctgggccgcccctcgcacatctttgacctcgacaaaatccatggcggg
cttgacgtccgctggggcaagcccggcgagacgctcaagctcctcaatggcaataccgtg
acggtggacgaaaaggtcggcgtgattgccgacgacgaacaggtggagtcgctggccggc
atcatgggcggcgatgcaacttccgtatccgacgacaccaaaaacgtctatgtcgaagcc
gctttctggtggcccaaagcgattgccggccgctcacgccgctataacttctcgaccgat
gcgggtcaccgcttcgagcgcggtgtggatcccggccagaccgtggagcacatcgagcgc
atcacgcagctgatcatcgacatttgcagcaccgccgataccgcgtgcggcccgatggac
gaccagcaggtcaacctgcccaaggccgcgccggtcaccttgcgcgtggcccgtgcagcc
aaggtgatcggcatgccgctcacgcaggcgcaatgcctggacgccctccagcgcctcggc
ttgccggtggcgcaaggcgagggcacgctcaccgtgacgccacccagctaccgcttcgac
ttgcagatcgaagaagacctgattgaagaagtggtgcgcatggtgggctacaaccagctc
cccgaaacgccgccgctggcgcccatcacggccaggttgcgcgctgaggccgaacgcagt
ccgtttggcgtgcggcgcgcgctggcgtcgctgggttatcaagagacgatcaacttcagc
tttgtggaagagcgctgggagcatgaactcgccggcaatcccaaccccatcaagctgctc
aatcccatcgccagccagatgagcgtgatgcgctcttccttgctgggctcgctgctgcaa
gtgctcaagttcaacctggaccgcaaggctccgcgcgtgaatgtgtttgagctgggccgc
gtgttcctgcgcgacgcgcaaagtcagaacaccgataccaccgtggccggcttcaaccag
cccatgcgtgtggccggcctggcttacggcccgcgtgcggcgctgaactggagccagccc
gacaaggcggtggatttcttcgacatcaagggcgacgtggaggctttgctcgcgccgctc
aaggctgtctttgcgccggcggcgcaccctgccatgcaccccggccgttgcgcgagtgtg
tcggtgggcggcagggcgattggttttgtgggcgagttgcatccgcagtggcgccagggc
tacgacctggcccaggcgccgctgctgttcgagctggagcttgacgccgtgctgcagcgt
caggtgccggagttcaagccggtcagcaagctgcagccggtcgagcgcgacatcgccgtc
atcgtggccgagggcgtcacacacgccgcgctgatgtcggccatccacggcgccaatacg
cagggcctgctcaagggcgcgacgctgtttgacgtctatcgcccccagcaagccagcgcc
agcatgcagatgggcgaaaaaagcctggccgtgcgcttggtgctttcgagcgacgccgct
acactgaccgacgaggagattgaggcggccgttcaggcggttctcgcaaatctgcagggt
cagttgggcgcacggttgcgtgcctga
DBGET
integrated database retrieval system
