Polaromonas sp. SP1: DT070_19920
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Entry
DT070_19920 CDS
T05689
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
pos
Polaromonas sp. SP1
Pathway
pos00906
Carotenoid biosynthesis
pos01100
Metabolic pathways
pos01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
DT070_19920 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pos01006
]
DT070_19920 (hpnD)
Enzymes [BR:
pos01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
DT070_19920 (hpnD)
Prenyltransferases [BR:
pos01006
]
Terpene biosynthesis
Squalene/phytoene synthase
DT070_19920 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
TarS_linker
CSTF_C
Motif
Other DBs
NCBI-ProteinID:
AYQ30082
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All DBs
Position
4239484..4240326
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AA seq
280 aa
AA seq
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MTPEQYVQQKAAASGSSFYYAFLFLPKERRAAITAFYAFCREIDDVVDEVTDPGVARTKL
AWWHSEVLKSYAGQPTHPVMKALMPLAATYRIEARHLQAVIDGCQMDLEQNRYLDFPGLR
QYCHLVAGIVGEVAARIFGQTDEATTAYAHKLGLAFQLTNIIRDVGEDAMRGRIYLPVNE
LQQFDVKAHEILKRQYSDRFTALMKFQTDRALALYDEALAMLPETDRRAQKPGLMMASIY
RTLLREIAADGYQVLHQRVSLTPLRKFWLAWKTQAFGRVV
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgacgcctgagcagtatgtccagcaaaaagccgccgcatccggcagcagtttttattac
gccttcctgtttttacccaaagagcggcgcgccgccatcaccgccttctacgccttttgc
cgcgagatcgacgatgtggtggacgaggtcaccgaccccggcgtcgcacgcaccaagctg
gcctggtggcacagcgaagtgctcaagtcctatgccgggcagccgacgcacccggtcatg
aaagcgctgatgccgctggccgccacctaccgcatcgaggcccgccacctgcaggctgtc
atcgacggctgccagatggacctggagcaaaaccggtacctcgactttcccggcctcagg
cagtattgccacctggtggccggcattgtgggcgaggtggctgcgcgcatcttcggtcag
acggacgaggccactaccgcctacgcgcacaaactgggcctggctttccagctgaccaac
atcatccgcgacgtgggcgaagacgcgatgcgcgggcgcatttacttgcccgtcaacgag
ttgcagcagtttgacgtgaaggcgcatgagattttgaagcgccaatactccgaccgtttc
accgcgctgatgaagttccagaccgaccgcgcgctggcgctgtacgacgaagcactggcc
atgctgcccgagaccgaccgccgcgcgcaaaagcccggcctcatgatggccagcatctac
cgcacgctgctgcgcgaaatcgccgccgacggctaccaggtgctgcaccagcgcgtgagc
ctcacgccgctgcgcaagttctggctggcgtggaaaactcaggccttcggcagggttgtc
taa
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