Polaromonas sp. SP1: DT070_20990
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Entry
DT070_20990 CDS
T05689
Name
(GenBank) 16S rRNA pseudouridine(516) synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
pos
Polaromonas sp. SP1
Brite
KEGG Orthology (KO) [BR:
pos00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pos03009
]
DT070_20990
Enzymes [BR:
pos01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
DT070_20990
Ribosome biogenesis [BR:
pos03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
DT070_20990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AYQ30266
LinkDB
All DBs
Position
complement(4470350..4471096)
Genome browser
AA seq
248 aa
AA seq
DB search
MQIQEILFSQGFGTRRVCAGLVQQGFVAVDGSPCTDPAMEFIADGLRFTVQGTAWEYHEK
AYLMLHKPAGYECSQKPSTYPSIYTLLPAPIRQRGGGAAAGVQAVGRLDQDTTGLLLLSD
DGKFIHRMSSPKHHVPKVYEVRAKHPVDDKQIAKLLAGVVLDDDPKPVRAAACEKTGENQ
LSLTLTEGKYHQVKRMIAAVGNRVEDVAGLHRSRIGTLDLPADLKPGGWRWLTAEDMASI
SAKPVPKA
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atgcaaattcaagaaattctcttttcccagggctttggcacgcggcgcgtgtgcgcgggg
ctggttcaacaaggttttgtggctgtagacggctccccgtgtacagaccctgctatggaa
tttatagcggatggcctgcgcttcacggtgcagggcacggcgtgggagtaccacgagaag
gcctacctgatgctgcacaagccggccggctacgagtgttcgcaaaagcccagcacctac
cccagcatttacacgctgctgccggcgccgatacgccagcgcggcggcggcgcggcagcg
ggtgtgcaggcggtgggccggctggaccaggacacgaccggcctcttgctgctgtcggat
gatggcaagttcatccaccgcatgagctcgcccaagcaccatgtgcccaaggtgtacgag
gtccgtgccaagcacccggtggacgacaagcagatcgccaaactgctggccggtgtggtg
ctggacgatgaccccaagcccgtgcgcgccgccgcctgtgaaaaaaccggcgagaaccag
ctcagcctgacgttgaccgaaggcaaataccaccaggtcaagcgcatgattgccgctgtg
ggcaaccgggtggaagacgtcgccggcctgcaccgctcgcgcatcggcacgctggacttg
ccggccgacctgaaacccggcggctggcgctggctgacggccgaagacatggccagcatc
tcggccaagcctgttccgaaagcctga
DBGET
integrated database retrieval system
