Porphyrobacter sp. YT40: E2E27_00285
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Entry
E2E27_00285 CDS
T06153
Name
(GenBank) PBP1A family penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
pot
Porphyrobacter sp. YT40
Pathway
pot00550
Peptidoglycan biosynthesis
pot01100
Metabolic pathways
pot01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
E2E27_00285
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
E2E27_00285
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pot01003
]
E2E27_00285
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
E2E27_00285
Enzymes [BR:
pot01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
E2E27_00285
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
E2E27_00285
Glycosyltransferases [BR:
pot01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
E2E27_00285
Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
E2E27_00285
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transgly
Transpeptidase
WHD_RGF3
Motif
Other DBs
NCBI-ProteinID:
QDH32914
LinkDB
All DBs
Position
complement(59707..61899)
Genome browser
AA seq
730 aa
AA seq
DB search
MSRRGEQLQNKRARGSRRAAAERNAAPASDAAPTGPGGGPPRWRVWLKRLFLWGGALAVL
GLVVLAFAVGFAASSLPDYGTLKATQPGQTIVVRARDGRELVEIGPSFGEWLTYNEIPTN
MTNAMVAVEDKRFQSHFGVDPVRLTGAVVEWVTGSRSRIGGTSTITQQLARNLFLNNNRT
PDRKAREAVLAMALEWKFSKEQILELYLNKVYFGGGAYGIDSASRKFFSHPASELSVEEA
AIIAGLVKAPSSYSPTADVQAAVDRAQVVLKLMQEQGYITADEAQVDVSAVQLKEQAGQN
SVRYFTDWVLPQLDIILPETYEPIEVWTTLDVGMQRAATAAIEANTPKGAQGALVSLDRD
GAILAMVGGTDYVASNYNRATAALRQPGSAWKLFVYLAALEAGYTPEDRVNDTPVTIGGW
SPRNSNGRNVGETDLRTAFAFSINTVAAQLGNEVGFGTVASMARRFGVNSKIDTNPSMVL
GASEMRVIEMTQAFAGIAAKGSAVQPYGITKVTSADGAVLYRHEEVNPSPQIPDYVVAGI
TDLLQAAVQTGTGRAAQIGRPVAGKTGTTSSNKDGWFIGFSSGITTGVWMGRDDAKPVPG
LQGGRAPAQAFAAYMRYAVKSRPVEEFDVTLNLPEWQLEPDEEAMFGSPDDYYYIDEQGN
MVEPGTRENGPDPFGPDSGRGVNAPPAASEEFLEQATGGALPQNPRPQRDPQRDPPRRPP
PQPAIKPADQ
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagacggggtgagcagttgcagaacaagcgcgcgcgcggttcccgccgggcggcg
gccgaacgcaatgccgcgccagcctccgacgctgcgcccacagggccgggcggcgggccg
ccgcgctggcgggtgtggttgaagcggctgttcctgtggggcggcgcgctggcggttctg
ggcctcgtcgtgctggccttcgcagtcggctttgccgcctcctcgctccccgattacggc
acgctcaaggcgacccagccgggccagaccatcgtcgtgcgcgcgcgcgacgggcgtgag
ctggtcgagatcgggccgagcttcggcgaatggctcacctacaacgaaatcccgacaaac
atgaccaatgccatggtcgcggtggaggacaagcgcttccagtcgcatttcggggtcgac
ccggtgcgcctgacgggcgcggtggtggaatgggtgacgggatcgcgctcgcgcatcggc
ggcacctcgaccatcacccagcagttggcccgcaacctgttcctcaacaacaaccgcacc
ccggaccgcaaggcgcgcgaggcggtgctggcgatggcgctggaatggaaattctcgaag
gaacagatcctcgagctctatctgaacaaggtctatttcggcggcggggcctacgggatc
gacagcgccagccgcaaattcttcagccaccccgcgagcgagctcagcgtcgaggaagcc
gcgatcatcgccgggctggttaaggcccccagctcctattcgcccaccgccgacgtgcag
gccgcggtcgaccgtgcgcaggtggttctgaagctgatgcaggaacagggctacatcacc
gccgacgaggcgcaggtcgatgtcagcgcggtgcagctgaaggagcaggccgggcagaac
tcggtgcgctacttcaccgactgggtgctgccgcagctcgatatcatcctgcctgaaacc
tacgagccgatcgaggtgtggacgacgctcgatgtcgggatgcagcgcgccgcgaccgcc
gcgatcgaggccaatacccccaagggcgcgcagggtgcgctggtcagtctcgaccgcgac
ggcgcaattctcgcgatggtgggcgggacggattacgtcgccagcaactacaaccgtgcc
accgccgcactgcgccagcccggatcggcgtggaagctgttcgtctatctcgccgcgctc
gaggcgggatacacgcccgaggaccgggtcaacgacaccccggtgaccatcggcggctgg
agcccgcgcaattccaacggtcgcaacgtgggcgagaccgatctgcgcaccgccttcgcc
ttctcgatcaacaccgtcgcggcgcagctcggcaacgaagtcgggttcggcacggtcgcg
tcgatggcgcggcggttcggggtgaattccaagatcgacacaaacccttcgatggtgctg
ggtgcctcggaaatgcgcgtgatcgagatgacccaggccttcgccgggatcgcggccaag
ggatccgcggtgcagccctatggcatcaccaaggtgaccagtgcggatggcgcggtgctc
taccgccatgaagaggtgaacccctcgccgcaaatccccgattacgtcgtggccgggatc
accgaccttttgcaggccgcggtgcagaccggcaccgggcgcgcggcgcagatcgggcgg
cccgtggcgggcaagaccggcaccacctcgtcgaacaaggacggctggttcatcggcttt
tcgagcgggatcaccaccggcgtgtggatgggccgcgacgatgccaagcccgtccccggc
ctgcagggtggccgcgcccccgcacaggcctttgccgcctatatgcgctatgccgtcaag
agccgcccggtcgaggaattcgacgtcacgctcaacctgcccgaatggcagctggagccc
gacgaggaagcaatgttcggcagcccggacgactattactacatcgacgaacagggcaac
atggtcgagcccggcacgcgcgagaacgggccggatcccttcgggcccgacagcgggcgc
ggcgtcaatgcaccgccagcggcgagcgaggagttcctcgaacaggcaaccggcggcgcg
ctgccgcagaacccccgcccgcaacgtgatccgcagcgcgacccgccgcgccgcccgccg
ccgcagcccgcgatcaagcccgcagatcagtag
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