Porphyrobacter sp. YT40: E2E27_00880
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Entry
E2E27_00880 CDS
T06153
Name
(GenBank) L,D-transpeptidase family protein
KO
K21470
L,D-transpeptidase YcbB
Organism
pot
Porphyrobacter sp. YT40
Brite
KEGG Orthology (KO) [BR:
pot00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pot01002
]
E2E27_00880
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
E2E27_00880
Peptidases and inhibitors [BR:
pot01002
]
Cysteine peptidases
Family C82
E2E27_00880
Peptidoglycan biosynthesis and degradation proteins [BR:
pot01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
E2E27_00880
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
Motif
Other DBs
NCBI-ProteinID:
QDH36005
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All DBs
Position
complement(180538..181962)
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AA seq
474 aa
AA seq
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MRFAGKLAGGIAVAALVASAALAQETAAPAQSVRANPEAALQGGPAPAKLPPPSETQKRP
SVAETFGQTVSEPVVQGAETAVPLVQNWTVGQAARLVAVIEGIGAEGLDPKDYDLEPLRV
ALASGPSKELNELASQSFVWLVEDLRDGRTPMEAREQWFVIDPDRDLFPAGAVMAEALAS
GDIAGALMKLNPTHPDYARLKAELAATSDGQTARRKLIRANMDRWRWLQRDLGAQYLITN
VPEFQLRLTVKNKIIRSYRTIVGKPGRTATPQLAEMVEGVVFNPTWTVPQSIVKGEGLGA
KVLANPAWGKRNGYVATKGANGYVTVVQQPGPGNSLGRMKLEMPNEHAIFFHDTPSRHLF
ANDFRALSHGCVRTERALELAMTMAILGKGATKEEAVAIADSGKYTKVMLEKQFPAYITY
FTMATDINGEMATFKDIYGRDTKVLASLDKPRVRNRSSVPTDEVIVIEDDLQDT
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgagatttgcgggcaagttggcaggcgggattgcggtggcggcgctggtggcaagcgcg
gcgctggcgcaggaaaccgctgcgcccgcccagtcggtgcgcgccaatcccgaagccgcc
ttgcagggtggcccggccccggcgaaactgccgccccccagcgaaacacaaaagcgtccg
tcggtcgccgaaacctttggccagaccgtgtccgaaccggtggtgcagggcgccgagacc
gccgttccgctggtccagaactggaccgtggggcaggccgcgcgcctcgtcgccgtgatc
gaggggatcggcgccgaggggctcgaccccaaggattacgatctcgaaccgctcagggtc
gcgctcgcctcgggcccgtcgaaggagctgaacgagctcgcctcgcaaagcttcgtgtgg
ctggtcgaggacctgcgcgacgggcgcaccccgatggaggcgcgcgagcagtggttcgtg
atcgaccccgaccgtgacctgtttccggcaggcgccgtcatggccgaggcgctggcgagc
ggcgacatcgcgggcgcgctgatgaagctcaatcccacccatcccgattacgcccggctg
aaggcggaactggcagcgacgtccgacggccagaccgcgcgccgcaagctgatccgtgcc
aacatggaccgctggcgctggctccagcgcgatctgggcgcgcaatatctcatcaccaat
gtgcccgaattccagctgcggctgacggtgaagaacaagatcatccgcagctatcgcacc
atcgtcggcaagccggggcgcaccgccactccgcagctggccgagatggtcgaaggcgtc
gtcttcaacccgacctggacggtgccgcagtcgatcgtcaagggcgaggggctgggcgcg
aaggtgctcgccaatccggcatggggcaagcgcaacggctatgtcgcgaccaagggtgca
aatggctatgtcaccgtggtgcagcagccggggccgggcaattcgctgggccgcatgaag
ctcgaaatgcccaacgaacacgcgatcttcttccacgacacgccttcgcggcacctgttc
gccaatgatttccgcgcgctctcccacggctgcgtgcgcaccgagcgggcgctcgagctg
gcgatgacgatggcgatcctcggcaagggcgcgaccaaggaagaagcggtcgcgatcgcg
gattcgggcaagtacaccaaggtgatgctcgaaaagcagttcccggcctatatcacctat
ttcacgatggcgaccgacatcaacggcgagatggcgaccttcaaggacatctacggccgc
gacaccaaggtgctcgccagcctcgacaagccgcgcgtgcgcaaccgcagcagcgtgccg
accgacgaggtgatcgtgatcgaggacgacctgcaggacacctaa
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